B6JB65 (B6JB65_OLICO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Fumarate hydratase class II 1 EMBL AEI07392.1
EC=4.2.1.2 EMBL AEI07392.1

Submitted name:
Fumarate hydratase, class II EMBL ACI92406.1
EC=4.2.1.2 EMBL ACI92406.1

Gene names

Name:	fumC EMBL ACI92406.1
Ordered Locus Names:	OCA5_c26980 EMBL AEI07392.1, OCAR_5274

Organism

Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) [Complete proteome] [HAMAP]

Taxonomic identifier

504832 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Oligotropha

Protein attributes

Sequence length	468 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Molecular function	Lyase SAAS SAAS018951 EMBL ACI92406.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	fumarate metabolic process Inferred from electronic annotation. Source: InterPro tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Cellular component	tricarboxylic acid cycle enzyme complex Inferred from electronic annotation. Source: InterPro
Molecular function	fumarate hydratase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B6JB65 [UniParc]. Last modified December 16, 2008. Version 1. Checksum: EB47D0BBAC5FF57B	FASTA	468	50,052
	10 20 30 40 50 60 MAPTNKTTRT ETDTFGPIEV AADRYWGAQT ERSRNNFKIG TEHMPLPLIR AMAIVKLAAA 70 80 90 100 110 120 KTNLDLKLID KKLADAIIAA AQEIIDGKLN DHFPLVVWQT GSGTQTNMNL NEVISNRANE 130 140 150 160 170 180 MLGGERGTKK PVHPNDHVNM GQSSNDAFPT AMHIAAAEEI AHTLIPALEE LLAALRAKQK 190 200 210 220 230 240 EFASIVKIGR THTQDATPLT LGQEFSGYAA QVESGIARIK ESAKSLNLLA QGGTAVGTGL 250 260 270 280 290 300 NAKPGFAEGF AKHAAAITGL PFVTAPNKFE ALASNDSYVY VHGAINATAT GLFKIANDIR 310 320 330 340 350 360 LLGSGPRSGL GELILPENEP GSSIMPGKVN PTQCEALTMV CCQIFGNQTT LTTAGSQGHF 370 380 390 400 410 420 ELNVYKPVMV FAMLTSIRLM ADAARSFTQN CVIGIRADEK RIGDLMQRSL MLVTALAPKI 430 440 450 460 GYDNAAKIAK TAHANGTTLK EEALRLGFVT AEEFDSIVRP EKMTSSSN

References

[1]	"Genome sequence of the chemolithoautotrophic bacterium Oligotropha carboxidovorans OM5T." Paul D., Bridges S., Burgess S.C., Dandass Y., Lawrence M.L. J. Bacteriol. 190:5531-5532(2008) [PubMed: 18539730] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 49405 / DSM 1227 / OM5 [Mississippi].
[2]	"Complete genome sequences of the chemolithoautotrophic Oligotropha carboxidovorans strains OM4 and OM5." Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G., Meyer O. J. Bacteriol. 193:5043-5043(2011) [PubMed: 21742883] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 49405 / DSM 1227 / OM5 and OM5 EMBL AEI07392.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001196 Genomic DNA. Translation: ACI92406.1. CP002826 Genomic DNA. Translation: AEI07392.1.
RefSeq	YP_002288271.1. NC_011386.1. YP_004633633.1. NC_015684.1.
3D structure databases
ProteinModelPortal	B6JB65.
SMR	B6JB65. Positions 9-463.
ModBase	Search...
Protein-protein interaction databases
STRING	B6JB65.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	10847830. 6991261.
GenomeReviews	Gene locus OCAR_5274 in contig CP001196_GR.
KEGG	oca:OCAR_5274.
PATRIC	22804473. VBIOliCar134280_1207.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG284369.
OMA	RIEKDTM.
ProtClustDB	PRK00485.
Family and domain databases
HAMAP	MF_00743. FumaraseC. [Tree]
InterPro	IPR003031. D_crystallin. IPR005677. Fum_hydII. IPR018951. Fumarase_C_C. IPR000362. Fumarate_lyase. IPR020557. Fumarate_lyase_CS. IPR008948. L-Aspartase-like. IPR024083. L-Aspartase-like_N. IPR022761. Lyase1_N. [Graphical view]
Gene3D	G3DSA:1.10.275.10. G3DSA:1.10.275.10. 1 hit.
KO	K01679.
Pfam	PF10415. FumaraseC_C. 1 hit. PF00206. Lyase_1. 1 hit. [Graphical view]
PRINTS	PR00145. ARGSUCLYASE. PR00149. FUMRATELYASE.
SUPFAM	SSF48557. L-Aspartase-like. 1 hit.
TIGRFAMs	TIGR00979. FumC_II. 1 hit.
PROSITE	PS00163. FUMARATE_LYASES. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B6JB65_OLICO

Accession

Primary (citable) accession number: B6JB65

Entry history

Integrated into UniProtKB/TrEMBL:	December 16, 2008
Last sequence update:	December 16, 2008
Last modified:	January 25, 2012
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)