B6J9Z3 (RL28_OLICO) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L28

Gene names

Name:	rpmB
Ordered Locus Names:	OCAR_4063, OCA5_c04430

Organism

Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) [Complete proteome] [HAMAP]

Taxonomic identifier

504832 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Oligotropha

Protein attributes

Sequence length	97 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L28P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 97	97	50S ribosomal protein L28 HAMAP MF_00373		PRO_1000121663

Sequences

	Sequence		Length	Mass (Da)
	B6J9Z3 [UniParc]. Last modified December 16, 2008. Version 1. Checksum: F8E460DE66B582E6	FASTA	97	10,579
	10 20 30 40 50 60 MSRRCELTAK GPQVGHKVSH SNIKSKRRFL PNLCNVTLMS ETLGQSVRLR VSTNALKSVD 70 80 90 HNGGLDAFLL KANIANLSPK AADLKRQIEK KKLAAAS

References

[1]	"Genome sequence of the chemolithoautotrophic bacterium Oligotropha carboxidovorans OM5T." Paul D., Bridges S., Burgess S.C., Dandass Y., Lawrence M.L. J. Bacteriol. 190:5531-5532(2008) [PubMed: 18539730] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 49405 / DSM 1227 / OM5.
[2]	"Complete genome sequences of the chemolithoautotrophic Oligotropha carboxidovorans strains OM4 and OM5." Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G., Meyer O. J. Bacteriol. 193:5043-5043(2011) [PubMed: 21742883] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 49405 / DSM 1227 / OM5.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001196 Genomic DNA. Translation: ACI91214.1. CP002826 Genomic DNA. Translation: AEI05168.1.
RefSeq	YP_002287079.1. NC_011386.1. YP_004631409.1. NC_015684.1.
3D structure databases
ProteinModelPortal	B6J9Z3.
ModBase	Search...
Protein-protein interaction databases
STRING	B6J9Z3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	10845575. 6991526.
GenomeReviews	Gene locus OCAR_4063 in contig CP001196_GR.
KEGG	oca:OCAR_4063.
PATRIC	22802135. VBIOliCar134280_0060.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG597003.
OMA	ELSMRAR.
ProtClustDB	PRK00359.
Family and domain databases
HAMAP	MF_00373. Ribosomal_L28. [Tree]
InterPro	IPR001383. Ribosomal_L28. [Graphical view]
KO	K02902.
Pfam	PF00830. Ribosomal_L28. 1 hit. [Graphical view]
TIGRFAMs	TIGR00009. L28. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RL28_OLICO

Accession

Primary (citable) accession number: B6J9Z3
Secondary accession number(s): F8BVA8

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 14, 2009
Last sequence update:	December 16, 2008
Last modified:	January 25, 2012
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program