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B6J952

- B6J952_COXB1

UniProt

B6J952 - B6J952_COXB1

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

CbuK_0042

Organism
Coxiella burnetii (strain CbuK_Q154) (Coxiella burnetii (strain Q154))
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 39 (01 Oct 2014)
      Sequence version 1 (16 Dec 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC
    3. DNA primase activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciCBUR434924:GHWU-42-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
    Gene namesi
    Ordered Locus Names:CbuK_0042Imported
    OrganismiCoxiella burnetii (strain CbuK_Q154) (Coxiella burnetii (strain Q154))Imported
    Taxonomic identifieri434924 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaLegionellalesCoxiellaceaeCoxiella
    ProteomesiUP000002504: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi434924.CbuK_0042.

    Structurei

    3D structure databases

    ProteinModelPortaliB6J952.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3285.
    HOGENOMiHOG000222509.
    KOiK01971.
    OrthoDBiEOG661H49.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B6J952-1 [UniParc]FASTAAdd to Basket

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    MILLSLKHYR QKRDFTKTSE PQGESASSSQ QFIYVIQKHD ASHLHYDLRL    50
    ELDGVLKSWA VPKGPSLNSD LKRLAVEVED HPIDYATFEG NIPKGQYGAG 100
    PVIVWDKGTW QPEGNAKENL KKGKLVFIIN GEKLKGKWAL VRLKTDDSKN 150
    NWLLIKKKDH YATERFDIDN YPLSVISGAS IEEIKNHKLD LSLSDLKNAK 200
    KTVVPEFIQP QLAKLKTVVP DSPDWIHEIK FDGYRIICII KKGIIQLMTR 250
    NQKNWTEKLA GLAETMKSIP IDESILDGEI VVFDESGKTD FQLLQNAIKA 300
    KKYNEIKYYL FDIPFCQKFD LSQVPLIMRK RLLKKLILQW KEKSGSILYS 350
    SHIKGNGKAI LERACELGLE GIISKKIDAA YEQRRSSSWI KLKCKRQQEF 400
    VIGGYTKPRG EQLYFGALLL GYYQNKKLIY CGRVGTGFSS LSLKDIYEKL 450
    INREQKAPAF SELPPFGIKA GNHWVKPELV AEIEFAEWTK DKRLRQPVFK 500
    GLREDKEAKG VKLETVKKTT VKNKSNNIKL TNPEKILYPE EKITKRQLAD 550
    FYSKIADRLL PHIVHRPLML LRCPNGYNKE CFFQKHPDQN GEEFVYSVEI 600
    EEKERKRYLT IHDEKGLLAL VQMGVLEIHP WGSSDSHPEK PDRLIFDIDP 650
    HPAVSWKAVI NCATDVFEVL KALGLRSFVK TSGGKGLHVY VPIQPQLGWE 700
    KLHEFAQKLA KLIVQVNPRL YTAELSKGKR LNKIFIDYIR NNRGATCVAP 750
    YSTRAKKHVP LSTPVSWDEL SAVKSPTQFT IKNIFHRLEA LNQDPWEEFF 800
    DIKQSITASM WKFFS 815
    Length:815
    Mass (Da):93,662
    Last modified:December 16, 2008 - v1
    Checksum:i9FDC8E89741E426C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001020 Genomic DNA. Translation: ACJ19369.1.
    RefSeqiWP_005770020.1. NC_011528.1.
    YP_002304514.1. NC_011528.1.

    Genome annotation databases

    EnsemblBacteriaiACJ19369; ACJ19369; CbuK_0042.
    GeneIDi7014556.
    KEGGicbc:CbuK_0042.
    PATRICi17915505. VBICoxBur77120_0083.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001020 Genomic DNA. Translation: ACJ19369.1 .
    RefSeqi WP_005770020.1. NC_011528.1.
    YP_002304514.1. NC_011528.1.

    3D structure databases

    ProteinModelPortali B6J952.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 434924.CbuK_0042.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACJ19369 ; ACJ19369 ; CbuK_0042 .
    GeneIDi 7014556.
    KEGGi cbc:CbuK_0042.
    PATRICi 17915505. VBICoxBur77120_0083.

    Phylogenomic databases

    eggNOGi COG3285.
    HOGENOMi HOG000222509.
    KOi K01971.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci CBUR434924:GHWU-42-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Comparative genomics reveal extensive transposon-mediated genomic plasticity and diversity among potential effector proteins within the genus Coxiella."
      Beare P.A., Unsworth N., Andoh M., Voth D.E., Omsland A., Gilk S.D., Williams K.P., Sobral B.W., Kupko J.J. III, Porcella S.F., Samuel J.E., Heinzen R.A.
      Infect. Immun. 77:642-656(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CbuK_Q154Imported.

    Entry informationi

    Entry nameiB6J952_COXB1
    AccessioniPrimary (citable) accession number: B6J952
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 16, 2008
    Last sequence update: December 16, 2008
    Last modified: October 1, 2014
    This is version 39 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3