B6J952 (B6J952_COXB1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent DNA ligase EMBL ACJ19369.1
EC=6.5.1.1 EMBL ACJ19369.1

Gene names

Ordered Locus Names:

CbuK_0042 EMBL ACJ19369.1

Organism

Coxiella burnetii (strain CbuK_Q154) (Coxiella burnetii (strain Q154)) [Complete proteome] [HAMAP] EMBL ACJ19369.1

Taxonomic identifier

434924 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Legionellales › Coxiellaceae › Coxiella › Coxiella burnetii

Protein attributes

Sequence length	815 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ACJ19369.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: EC DNA primase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B6J952 [UniParc]. Last modified December 16, 2008. Version 1. Checksum: 9FDC8E89741E426C	FASTA	815	93,662
	10 20 30 40 50 60 MILLSLKHYR QKRDFTKTSE PQGESASSSQ QFIYVIQKHD ASHLHYDLRL ELDGVLKSWA 70 80 90 100 110 120 VPKGPSLNSD LKRLAVEVED HPIDYATFEG NIPKGQYGAG PVIVWDKGTW QPEGNAKENL 130 140 150 160 170 180 KKGKLVFIIN GEKLKGKWAL VRLKTDDSKN NWLLIKKKDH YATERFDIDN YPLSVISGAS 190 200 210 220 230 240 IEEIKNHKLD LSLSDLKNAK KTVVPEFIQP QLAKLKTVVP DSPDWIHEIK FDGYRIICII 250 260 270 280 290 300 KKGIIQLMTR NQKNWTEKLA GLAETMKSIP IDESILDGEI VVFDESGKTD FQLLQNAIKA 310 320 330 340 350 360 KKYNEIKYYL FDIPFCQKFD LSQVPLIMRK RLLKKLILQW KEKSGSILYS SHIKGNGKAI 370 380 390 400 410 420 LERACELGLE GIISKKIDAA YEQRRSSSWI KLKCKRQQEF VIGGYTKPRG EQLYFGALLL 430 440 450 460 470 480 GYYQNKKLIY CGRVGTGFSS LSLKDIYEKL INREQKAPAF SELPPFGIKA GNHWVKPELV 490 500 510 520 530 540 AEIEFAEWTK DKRLRQPVFK GLREDKEAKG VKLETVKKTT VKNKSNNIKL TNPEKILYPE 550 560 570 580 590 600 EKITKRQLAD FYSKIADRLL PHIVHRPLML LRCPNGYNKE CFFQKHPDQN GEEFVYSVEI 610 620 630 640 650 660 EEKERKRYLT IHDEKGLLAL VQMGVLEIHP WGSSDSHPEK PDRLIFDIDP HPAVSWKAVI 670 680 690 700 710 720 NCATDVFEVL KALGLRSFVK TSGGKGLHVY VPIQPQLGWE KLHEFAQKLA KLIVQVNPRL 730 740 750 760 770 780 YTAELSKGKR LNKIFIDYIR NNRGATCVAP YSTRAKKHVP LSTPVSWDEL SAVKSPTQFT 790 800 810 IKNIFHRLEA LNQDPWEEFF DIKQSITASM WKFFS

References

[1]

"Comparative genomics reveal extensive transposon-mediated genomic plasticity and diversity among potential effector proteins within the genus Coxiella." Beare P.A., Unsworth N., Andoh M., Voth D.E., Omsland A., Gilk S.D., Williams K.P., Sobral B.W., Kupko J.J.III., Porcella S.F., Samuel J.E., Heinzen R.A. Infect. Immun. 77:642-656(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CbuK_Q154 EMBL ACJ19369.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001020 Genomic DNA. Translation: ACJ19369.1.
RefSeq	YP_002304514.1. NC_011528.1.
3D structure databases
ProteinModelPortal	B6J952.
ModBase	Search...
Protein-protein interaction databases
STRING	434924.CbuK_0042.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACJ19369; ACJ19369; CbuK_0042.
GeneID	7014556.
KEGG	cbc:CbuK_0042.
PATRIC	17915505. VBICoxBur77120_0083.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3285.
HOGENOM	HOG000222509.
KO	K01971.
ProtClustDB	CLSK915136.
Enzyme and pathway databases
BioCyc	CBUR434924:GHWU-42-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR014146. DNA_pol_LigD_ligase_dom. IPR002755. DNA_primase_S. IPR014144. LigD_PE_domain. IPR014145. LigD_pol. IPR012340. NA-bd_OB-fold. IPR014143. NHEJ_ligase_prk. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF01896. DNA_primase_S. 1 hit. PF13298. LigD_N. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR02777. LigD_PE_dom. 1 hit. TIGR02778. ligD_pol. 1 hit. TIGR02779. NHEJ_ligase_lig. 1 hit. TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B6J952_COXB1

Accession

Primary (citable) accession number: B6J952

Entry history

Integrated into UniProtKB/TrEMBL:	December 16, 2008
Last sequence update:	December 16, 2008
Last modified:	May 1, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)