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B6J952

- B6J952_COXB1

UniProt

B6J952 - B6J952_COXB1

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Protein
Submitted name: ATP-dependent DNA ligase
Gene
CbuK_0042
Organism
Coxiella burnetii (strain CbuK_Q154) (Coxiella burnetii (strain Q154))
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC
  3. DNA primase activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCBUR434924:GHWU-42-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:CbuK_0042Imported
OrganismiCoxiella burnetii (strain CbuK_Q154) (Coxiella burnetii (strain Q154))Imported
Taxonomic identifieri434924 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaLegionellalesCoxiellaceaeCoxiella
ProteomesiUP000002504: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi434924.CbuK_0042.

Structurei

3D structure databases

ProteinModelPortaliB6J952.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000222509.
KOiK01971.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B6J952-1 [UniParc]FASTAAdd to Basket

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MILLSLKHYR QKRDFTKTSE PQGESASSSQ QFIYVIQKHD ASHLHYDLRL    50
ELDGVLKSWA VPKGPSLNSD LKRLAVEVED HPIDYATFEG NIPKGQYGAG 100
PVIVWDKGTW QPEGNAKENL KKGKLVFIIN GEKLKGKWAL VRLKTDDSKN 150
NWLLIKKKDH YATERFDIDN YPLSVISGAS IEEIKNHKLD LSLSDLKNAK 200
KTVVPEFIQP QLAKLKTVVP DSPDWIHEIK FDGYRIICII KKGIIQLMTR 250
NQKNWTEKLA GLAETMKSIP IDESILDGEI VVFDESGKTD FQLLQNAIKA 300
KKYNEIKYYL FDIPFCQKFD LSQVPLIMRK RLLKKLILQW KEKSGSILYS 350
SHIKGNGKAI LERACELGLE GIISKKIDAA YEQRRSSSWI KLKCKRQQEF 400
VIGGYTKPRG EQLYFGALLL GYYQNKKLIY CGRVGTGFSS LSLKDIYEKL 450
INREQKAPAF SELPPFGIKA GNHWVKPELV AEIEFAEWTK DKRLRQPVFK 500
GLREDKEAKG VKLETVKKTT VKNKSNNIKL TNPEKILYPE EKITKRQLAD 550
FYSKIADRLL PHIVHRPLML LRCPNGYNKE CFFQKHPDQN GEEFVYSVEI 600
EEKERKRYLT IHDEKGLLAL VQMGVLEIHP WGSSDSHPEK PDRLIFDIDP 650
HPAVSWKAVI NCATDVFEVL KALGLRSFVK TSGGKGLHVY VPIQPQLGWE 700
KLHEFAQKLA KLIVQVNPRL YTAELSKGKR LNKIFIDYIR NNRGATCVAP 750
YSTRAKKHVP LSTPVSWDEL SAVKSPTQFT IKNIFHRLEA LNQDPWEEFF 800
DIKQSITASM WKFFS 815
Length:815
Mass (Da):93,662
Last modified:December 16, 2008 - v1
Checksum:i9FDC8E89741E426C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001020 Genomic DNA. Translation: ACJ19369.1.
RefSeqiWP_005770020.1. NC_011528.1.
YP_002304514.1. NC_011528.1.

Genome annotation databases

EnsemblBacteriaiACJ19369; ACJ19369; CbuK_0042.
GeneIDi7014556.
KEGGicbc:CbuK_0042.
PATRICi17915505. VBICoxBur77120_0083.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001020 Genomic DNA. Translation: ACJ19369.1 .
RefSeqi WP_005770020.1. NC_011528.1.
YP_002304514.1. NC_011528.1.

3D structure databases

ProteinModelPortali B6J952.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 434924.CbuK_0042.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACJ19369 ; ACJ19369 ; CbuK_0042 .
GeneIDi 7014556.
KEGGi cbc:CbuK_0042.
PATRICi 17915505. VBICoxBur77120_0083.

Phylogenomic databases

eggNOGi COG3285.
HOGENOMi HOG000222509.
KOi K01971.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci CBUR434924:GHWU-42-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Comparative genomics reveal extensive transposon-mediated genomic plasticity and diversity among potential effector proteins within the genus Coxiella."
    Beare P.A., Unsworth N., Andoh M., Voth D.E., Omsland A., Gilk S.D., Williams K.P., Sobral B.W., Kupko J.J.III., Porcella S.F., Samuel J.E., Heinzen R.A.
    Infect. Immun. 77:642-656(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CbuK_Q154Imported.

Entry informationi

Entry nameiB6J952_COXB1
AccessioniPrimary (citable) accession number: B6J952
Entry historyi
Integrated into UniProtKB/TrEMBL: December 16, 2008
Last sequence update: December 16, 2008
Last modified: September 3, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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