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B6J1J3 (B6J1J3_COXB2) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Ribonuclease E EMBL ACJ18821.1
EC=3.1.4.- EMBL ACJ18821.1
Gene names
Ordered Locus Names:CbuG_1527
OrganismCoxiella burnetii (strain CbuG_Q212) (Coxiella burnetii (strain Q212)) [Complete proteome] [HAMAP] EMBL ACJ18821.1
Taxonomic identifier434923 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Legionellales › Coxiellaceae › Coxiella ›

Protein attributes

Sequence length720 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL ACJ18821.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processRNA processing

Inferred from electronic annotation. Source: InterPro

   Molecular_functionRNA binding

Inferred from electronic annotation. Source: InterPro

ribonuclease activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B6J1J3 [UniParc].

Last modified December 16, 2008. Version 1.
Checksum: DA0A34E97B537113

FASTA72080,377
        10         20         30         40         50         60 
MKRMLINATQ PDEVRVAITD DSKLIDLDIE IPGQEQKKSN IYKGIITSIE PSLGAVFVNY 

        70         80         90        100        110        120 
GSERHGFLPL KEISREYFLQ DIEGDFDSID INRVLKLGQE LVVQVDKEER GTKGAALTTF 

       130        140        150        160        170        180 
ISLAGSFLVL MPNNPRAGGI SRRIEGDERD QLRETINQLS LPEGMGLIVR TAGLGRPKEE 

       190        200        210        220        230        240 
LEWDLKILLR YWEAVKQAAV AKPGPYLIHQ ESDVIIRAIR DYLRQDVEEI LIDDEVAFEN 

       250        260        270        280        290        300 
ARHYINQVRP QFVERLKLYR EHLPLFSRFQ IEQQIENAHQ REIRLPSGGS LIIDHSEALI 

       310        320        330        340        350        360 
AIDINSARAT RGASIEETAL STNLEAAEEI ARQLRIRDIG GLIVIDFIDM TPLRNQREVE 

       370        380        390        400        410        420 
NCLRNALSQD RARIQIGRIS RFGLLEMSRQ RLRSSLTRST QIACPRCNAE GTIRSIESLG 

       430        440        450        460        470        480 
LSIIHIIQEQ ASKAKNIHFQ LQAPVDLATY LINEKRELLR GIEHHYPVKI TIVPNQYMET 

       490        500        510        520        530        540 
PLYQLRQIKI DPASLEHGKG MASYKLTKVF KTEAPQKQEI RALSEPAIQQ FLTSPPAPTT 

       550        560        570        580        590        600 
PRKTPTPGLF KRLMGKMFGS EEEPSTAVTP PVKPHVPERH KPSSPPRGRR QGGYASRKST 

       610        620        630        640        650        660 
GPRRHHPRSG GGGGGHGQNR HGARSRRGTR GGRRDHGGGR GGPGYHTQST GPMPPLGEDV 

       670        680        690        700        710        720 
VDVNQLPMST PPSPPPPFLT DADVPPSRDE RRSGGINGDA DHGAKPDPNG KVSDDNRGNR

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References

[1]"Comparative genomics reveal extensive transposon-mediated genomic plasticity and diversity among potential effector proteins within the genus Coxiella."
Beare P.A., Unsworth N., Andoh M., Voth D.E., Omsland A., Gilk S.D., Williams K.P., Sobral B.W., Kupko J.J.III., Porcella S.F., Samuel J.E., Heinzen R.A.
Infect. Immun. 77:642-656(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CbuG_Q212.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001019 Genomic DNA. Translation: ACJ18821.1.
RefSeqYP_002303966.1. NC_011527.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING434923.CbuG_1527.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACJ18821; ACJ18821; CbuG_1527.
GeneID7013943.
KEGGcbg:CbuG_1527.
PATRIC17914135. VBICoxBur10955_1527.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1530.
HOGENOMHOG000258027.
KOK08300.
OMAEDSIIRK.
ProtClustDBCLSK914102.

Enzyme and pathway databases

BioCycCBUR434923:GC8S-1524-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012340. NA-bd_OB-fold.
IPR003029. Rbsml_prot_S1_RNA-bd_dom.
IPR019307. RNA-bd_AU-1/RNase_E/G.
IPR022967. RNA-binding_domain_S1.
IPR004659. RNase_E/G.
[Graphical view]
PfamPF10150. RNase_E_G. 1 hit.
PF00575. S1. 1 hit.
[Graphical view]
SMARTSM00316. S1. 1 hit.
[Graphical view]
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMsTIGR00757. RNaseEG. 1 hit.
PROSITEPS50126. S1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB6J1J3_COXB2
AccessionPrimary (citable) accession number: B6J1J3
Entry history
Integrated into UniProtKB/TrEMBL: December 16, 2008
Last sequence update: December 16, 2008
Last modified: May 29, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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