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Protein
Submitted name:

Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit

Gene

cbbL1

Organism
Rhodospirillum centenum (strain ATCC 51521 / SW)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciRCEN414684:GHCM-4035-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunitImported (EC:4.1.1.39Imported)
Gene namesi
Name:cbbL1Imported
Ordered Locus Names:RC1_4061Imported
OrganismiRhodospirillum centenum (strain ATCC 51521 / SW)Imported
Taxonomic identifieri414684 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesRhodospirillaceaeRhodospirillum
Proteomesi
  • UP000001591 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi414684.RC1_4061.

Structurei

3D structure databases

ProteinModelPortaliB6IYM6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini28 – 148121RuBisCO_large_NInterPro annotationAdd
BLAST
Domaini158 – 465308RuBisCO_largeInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105DT1. Bacteria.
COG1850. LUCA.
HOGENOMiHOG000230831.
KOiK01601.
OMAiQACDAYL.
OrthoDBiEOG6ZKXMS.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01338. RuBisCO_L_type1.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR020888. RuBisCO_lsu.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B6IYM6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDTRVSGDQL DAKARYKPGV LKYRQMGYWV PDYEPKDTDV LAVFRITPQD
60 70 80 90 100
GVDAEEAAAA VAGESSTATW TVVWTDRLTN CDHYRAKAYR VDPVPGSPGQ
110 120 130 140 150
YFAYIAYDLD LFEEGSIANL TASIIGNVFG FKPLKALRLE DMRIPVAYLK
160 170 180 190 200
TFQGPATGIV VERERLNVYG RPLLGATMKP KLGLSGRNYG RVVYEALKGG
210 220 230 240 250
LDFTKDDENI NSQPFMHWRD RFLYCMEGVN RAMAETGEVK GTYLNVTAAT
260 270 280 290 300
MEDMYERAEF AKELGSVIIM IDLVIGYTAI QSMAKWARKN DMILHLHRAG
310 320 330 340 350
HSTYTRQKSH GVSFRVIAKW MRMAGVDHIH AGTVVGKLEG DPNVIRGVYD
360 370 380 390 400
TCRETHVPQN LQHGIFFDQP WASLKKLMPV ASGGIHAGQM HQLLTYLGED
410 420 430 440 450
VVLQFGGGTI GHPEGIQAGA TANRVALEAM VKARNEGRDI WNEGPQILQD
460 470 480
AARWCGPLRA ALETWKDVTF DYASTDSVDF VPTPTPA
Length:487
Mass (Da):54,092
Last modified:December 16, 2008 - v1
Checksum:i5CA7C2B73054AE37
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000613 Genomic DNA. Translation: ACJ01400.1.
RefSeqiWP_012569173.1. NC_011420.2.

Genome annotation databases

EnsemblBacteriaiACJ01400; ACJ01400; RC1_4061.
KEGGirce:RC1_4061.
PATRICi23323296. VBIRhoCen1465_3954.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000613 Genomic DNA. Translation: ACJ01400.1.
RefSeqiWP_012569173.1. NC_011420.2.

3D structure databases

ProteinModelPortaliB6IYM6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi414684.RC1_4061.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACJ01400; ACJ01400; RC1_4061.
KEGGirce:RC1_4061.
PATRICi23323296. VBIRhoCen1465_3954.

Phylogenomic databases

eggNOGiENOG4105DT1. Bacteria.
COG1850. LUCA.
HOGENOMiHOG000230831.
KOiK01601.
OMAiQACDAYL.
OrthoDBiEOG6ZKXMS.

Enzyme and pathway databases

BioCyciRCEN414684:GHCM-4035-MONOMER.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01338. RuBisCO_L_type1.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR020888. RuBisCO_lsu.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of Rhodospirillum centenum."
    Touchman J.W., Bauer C., Blankenship R.E.
    Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51521 / SWImported.

Entry informationi

Entry nameiB6IYM6_RHOCS
AccessioniPrimary (citable) accession number: B6IYM6
Entry historyi
Integrated into UniProtKB/TrEMBL: December 16, 2008
Last sequence update: December 16, 2008
Last modified: April 13, 2016
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.