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B6IR89 (B6IR89_RHOCS) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:RC1_0538
OrganismRhodospirillum centenum (strain ATCC 51521 / SW) [Complete proteome] [HAMAP] EMBL ACI97975.1
Taxonomic identifier414684 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesRhodospirillaceaeRhodospirillum

Protein attributes

Sequence length875 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
B6IR89 [UniParc].

Last modified December 16, 2008. Version 1.
Checksum: C9FFE8DA8DE59153

FASTA87598,679
        10         20         30         40         50         60 
MRKILTMRGS AWAVLVLLVL GNIGAWAFSN RPAMPERPWS GTIAGVAFNP YKVGQDPTEG 

        70         80         90        100        110        120 
KHPSRQDIAG DLDVVAPYVL SVRTYSALDG LEAIPELAAQ RGLLATAGAW ISQDLGANEQ 

       130        140        150        160        170        180 
QINALVRIAR RNDNVKRVMV GNEVMYRGDL EVEQLIDYVQ RVKRQVDVPV STAEPPYVWH 

       190        200        210        220        230        240 
EHPELAEAVD FITIHLLPYW EKVPIEQAMD QILTEYNRIK TAYPDKHILI GEVGWPSDGP 

       250        260        270        280        290        300 
YRGGAEASLV NQATFIRSFL NLAGEQRWDF YIMEAFDQPW KRVLGGPVEA NWGIWNADRQ 

       310        320        330        340        350        360 
LKFPMDGSVW EVPGWPVLCA IATALAFLPI FWFVLRRDDL KPAGQFFYGA LIQTVASALV 

       370        380        390        400        410        420 
WTWTEAVTAG MGPLSTIVFA LLLTAQIILL AVMLIDGLEL TEVVWTQNWK RRFEPIRGDS 

       430        440        450        460        470        480 
SGYAPKVSIH VPCYNEPAHM VIETLDALAR MTYPNFEVLV IDNNTRDEAV WKPLEEHCRK 

       490        500        510        520        530        540 
LGANFRFFHL PKWPGYKAGA LNFGIAMTAP DAEVIAVIDS DYQVRPDWLS ATVPYFRNPK 

       550        560        570        580        590        600 
VAFVQSPQDY REWNDHPFHR MINWEYQGFF KIGMIQRNER NAIIQHGTMT LIRTQVLKDV 

       610        620        630        640        650        660 
GWWAEWCICE DAELGLRLFE QGYESVYMPD SFGQGLVPDS FAGYKTQRFR WAYGAVQIIK 

       670        680        690        700        710        720 
RHWREFLPGG KRLTFGQKYH FVTGWLPWFA DAAHMAFVIG GVFWSAGLLL LPRYFELPPT 

       730        740        750        760        770        780 
VFLFPTLSVF FFKVICGLWL YEARVQCSLL DKISAAVAGM ALTHTVGRAV WQGLFTQGRP 

       790        800        810        820        830        840 
FVRTPKCENQ PALIQGFLNA KEEVYLMLGL WIAAAAVAWR IGGDNRDAYI WSLMLVVQSL 

       850        860        870 
PYIAALVVSC LNVLPKGRDA ADDALPAPAG AGGND 

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References

[1]"Genome sequence of Rhodospirillum centenum."
Touchman J.W., Bauer C., Blankenship R.E.
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000613 Genomic DNA. Translation: ACI97975.1.
RefSeqYP_002296788.1. NC_011420.2.

3D structure databases

ProteinModelPortalB6IR89.
ModBaseSearch...

Protein-protein interaction databases

STRINGB6IR89.

Protein family/group databases

CAZyGH17. Glycoside Hydrolase Family 17.
GT2. Glycosyltransferase Family 2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7005313.
GenomeReviewsGene locus RC1_0538 in contig CP000613_GR.
KEGGrce:RC1_0538.
PATRIC23316292. VBIRhoCen1465_0507.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG320835.
OMAIQHGTMT.
ProtClustDBCLSK866372.

Family and domain databases

InterProIPR000490. Glyco_hydro_17.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR001173. Glyco_trans_2.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PfamPF00332. Glyco_hydro_17. 1 hit.
PF00535. Glycos_transf_2. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
PROSITEPS00587. GLYCOSYL_HYDROL_F17. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB6IR89_RHOCS
AccessionPrimary (citable) accession number: B6IR89
Entry history
Integrated into UniProtKB/TrEMBL: December 16, 2008
Last sequence update: December 16, 2008
Last modified: December 14, 2011
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)