B6IPF2 (B6IPF2_RHOCS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Deoxyribose-phosphate aldolase EMBL ACI99654.1
EC=4.1.2.4 EMBL ACI99654.1

Gene names

Name:	deoC EMBL ACI99654.1
Ordered Locus Names:	RC1_2267

Organism

Rhodospirillum centenum (strain ATCC 51521 / SW) [Complete proteome] [HAMAP] EMBL ACI99654.1

Taxonomic identifier

414684 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhodospirillales › Rhodospirillaceae › Rhodospirillum

Protein attributes

Sequence length	268 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate By similarity. SAAS SAAS011343
Catalytic activity	2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde. SAAS SAAS011343
Pathway	Carbohydrate degradation; 2-deoxy-D-ribose 1-phosphate degradation; D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-alpha-D-ribose 1-phosphate: step 2/2. SAAS SAAS011343

Ontologies

Keywords
Ligand	Schiff base SAAS SAAS011343
Molecular function	Lyase SAAS SAAS011343 EMBL ACI99654.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	deoxyribonucleotide catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	deoxyribose-phosphate aldolase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B6IPF2 [UniParc]. Last modified December 16, 2008. Version 1. Checksum: E5AAE4D38A839892	FASTA	268	26,987
	10 20 30 40 50 60 MTDSTRLPPA AGPSPDDDAA VAARALPLLD LTSLNDGDDA DTVVRLCDRA QSAAGPVAAV 70 80 90 100 110 120 CIWPLWVAIA KSNLRGTGIR VATVVNFPGG SFPRERVLYE IGEALADGAD EIDVVMNYAD 130 140 150 160 170 180 VINGSGARAA ADLAACREAC GDATMKVILE TGSLAKPVLI AKAAGIAVEA GADFLKTSTG 190 200 210 220 230 240 KVPVGATPGA ARILLEACRD AGRPVGFKAS GGVRDIAGAR EYLALADAIC GPDWAGPATF 250 260 RFGASGLLDA LLATLGKGPA GPRSGSGY

References

[1]	"Genome sequence of Rhodospirillum centenum." Touchman J.W., Bauer C., Blankenship R.E. Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000613 Genomic DNA. Translation: ACI99654.1.
RefSeq	YP_002298467.1. NC_011420.2.
3D structure databases
ProteinModelPortal	B6IPF2.
ModBase	Search...
Protein-protein interaction databases
STRING	B6IPF2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7007035.
GenomeReviews	Gene locus RC1_2267 in contig CP000613_GR.
KEGG	rce:RC1_2267.
PATRIC	23319726. VBIRhoCen1465_2199.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG636421.
OMA	FELVKQC.
Family and domain databases
InterPro	IPR013785. Aldolase_TIM. IPR011343. DeoC. IPR002915. DeoC/AroFGH_arch. [Graphical view]
Gene3D	G3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KO	K01619.
PANTHER	PTHR10889. DeoC. 1 hit.
Pfam	PF01791. DeoC. 1 hit. [Graphical view]
PIRSF	PIRSF001357. DeoC. 1 hit.
TIGRFAMs	TIGR00126. DeoC. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B6IPF2_RHOCS

Accession

Primary (citable) accession number: B6IPF2

Entry history

Integrated into UniProtKB/TrEMBL:	December 16, 2008
Last sequence update:	December 16, 2008
Last modified:	December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)