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B6IDH2 (B6IDH2_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
At4g11350 EMBL ACI88736.1
Submitted name:
Uncharacterized protein EMBL AEE82999.1
Gene names
Ordered Locus Names:At4g11350 TAIR At4g11350
ORF Names:AT4G11350 EMBL AEE82999.1
OrganismArabidopsis thaliana (Mouse-ear cress) EMBL ACI88736.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length507 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
B6IDH2 [UniParc].

Last modified December 16, 2008. Version 1.
Checksum: F0E55E72C751213C

FASTA50758,208
        10         20         30         40         50         60 
MKGNQKDSSE KPIWDRSSSG ISMTRPGRLI IWLILFISVT YIIYTLKIVS TTHPCEDLTS 

        70         80         90        100        110        120 
ESILQQRPEK KAVTVTVKAV PAEQEATDLN HVVFGIAASS KLWKQRKEYI KIWYKPKKMR 

       130        140        150        160        170        180 
GYVWLDEEVK IKSETGDQES LPSVRISGDT SSFPYTNKQG HRSAIRISRI VSETLMSLDS 

       190        200        210        220        230        240 
ESKKNVRWFV MGDDDTVFVT DNLIRVLRKY DHEQMYYIGS LSESHLQNII FSYGMAYGGG 

       250        260        270        280        290        300 
GFAISYPLAV ALSKMQDQCI QRYPALYGSD DRMQACMAEL GVPLTKEIGF HQYDVHGNLF 

       310        320        330        340        350        360 
GLLAAHPITP FVSMHHLDVV EPIFPNMTRV RAIKKLTTPM KIDSAALLQQ SICYDKHKSW 

       370        380        390        400        410        420 
TISVSWGFAV QVFRGSFSPR EMEMPSRTFL NWYKRADYTA YAFNTRPVSR NHCQKPFVFH 

       430        440        450        460        470        480 
MSSAKFDPQL NTTVSEYTRH RVPQPACRWD MANPEEINTI VVYKKPDPHL WNRSPRRNCC 

       490        500 
RVLQTKRNNT LWINVGVCRA GEVTEVK

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana."
EU, CSHL and WU Arabidopsis Sequencing Project
Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M., de Simone V., Obermaier B. expand/collapse author list , Mache R., Mueller M., Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B., Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W., Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A., Martienssen R., McCombie W.R.
Nature 402:769-777(1999) [PubMed: 10617198] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]"Arabidopsis ORF clones."
de los Reyes C., Quan R., Chen H., Bautista V., Kim C.J., Ecker J.R.
Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BT050410 mRNA. Translation: ACI88736.1.
CP002687 Genomic DNA. Translation: AEE82999.1.
IPIIPI00532917.
RefSeqNP_192874.2. NM_117206.3.
UniGeneAt.33574.

3D structure databases

ModBaseSearch...

Protein family/group databases

CAZyGT31. Glycosyltransferase Family 31.

Proteomic databases

PRIDEB6IDH2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT4G11350.1; AT4G11350.1; AT4G11350.
GeneID826737.
GenomeReviewsGene locus AT4G11350 in contig CT486007_GR.
KEGGath:AT4G11350.

Organism-specific databases

TAIRAt4g11350.

Phylogenomic databases

eggNOGKOG2246.
GeneTreeEPGT00050000000455.
HOGENOMHBG593120.
OMASEYTRHR.
PhylomeDBB6IDH2.
ProtClustDBCLSN2686370.

Gene expression databases

GenevestigatorB6IDH2.

Family and domain databases

InterProIPR006740. DUF604.
[Graphical view]
PfamPF04646. DUF604. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB6IDH2_ARATH
AccessionPrimary (citable) accession number: B6IDH2
Entry history
Integrated into UniProtKB/TrEMBL: December 16, 2008
Last sequence update: December 16, 2008
Last modified: January 25, 2012
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info