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B6I3V4 (B6I3V4_ECOSE) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:ECSE_4007
OrganismEscherichia coli (strain SE11) [Complete proteome] [HAMAP]
Taxonomic identifier409438 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length464 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 1 family. RuleBase RU003690

Sequences

Sequence LengthMass (Da)Tools
B6I3V4 [UniParc].

Last modified December 16, 2008. Version 1.
Checksum: F73E29C572B6B14F

FASTA46452,510
        10         20         30         40         50         60 
MKAFPETFLW GGATAANQVE GAWQEDGKGI STSDLQPHGV MGKMEPRILG KENIKDVAID 

        70         80         90        100        110        120 
FYHRYPEDIA LFAEMGFTCL RISIAWARIF PQGDEAEPNE AGLAFYDRLF DEMAQAGIKP 

       130        140        150        160        170        180 
LVTLSHYEMP YGLVKNYGGW ANRAVIDHFE HYARTVFTRY QHKVALWLTF NEINMSLHAP 

       190        200        210        220        230        240 
FTGVGLAEES GEAEVYQAIH HQLVASARAV KACHSLIPEA KIGNMLLGGL VYPLTCQPQD 

       250        260        270        280        290        300 
MLEAMEENRR WMFFGDVQAR GQYPGYMQRF FRDHNITIEM TESDAEDLKH TVDFISFSYY 

       310        320        330        340        350        360 
MTGCVSHDES INKNAQGNIL NMIPNPHLKS SEWGWQIDPV GLRVLLNTLW DRYQKPLFIV 

       370        380        390        400        410        420 
ENGLGAKDSV EADGSIQDDY RIAYLNDHLV QVNEAIADGV DIMGYTSWGP IDLVSASHSQ 

       430        440        450        460 
MSKRYGFIYV DRDDNGEGSL TRTRKKSFGW YAEVIKTRGL SLKK 

« Hide

References

[1]"Complete genome sequence and comparative analysis of the wild-type commensal Escherichia coli strain SE11 isolated from a healthy adult."
Oshima K., Toh H., Ogura Y., Sasamoto H., Morita H., Park S.-H., Ooka T., Iyoda S., Taylor T.D., Hayashi T., Itoh K., Hattori M.
DNA Res. 15:375-386(2008) [PubMed: 18931093] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP009240 Genomic DNA. Translation: BAG79531.1.
RefSeqYP_002295282.1. NC_011415.1.

3D structure databases

ProteinModelPortalB6I3V4.
ModBaseSearch...

Protein-protein interaction databases

STRINGB6I3V4.

Protein family/group databases

CAZyGH1. Glycoside Hydrolase Family 1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBESCT00000106276; EBESCP00000101905; EBESCG00000106132.
GeneID7002392.
GenomeReviewsGene locus ECSE_4007 in contig AP009240_GR.
KEGGecy:ECSE_4007.
PATRIC18426658. VBIEscCol83070_4179.

Organism-specific databases

CMRSearch...

Phylogenomic databases

GeneTreeEBGT00050000010166.
HOGENOMHBG316462.
OMAFKCLRTS.
ProtClustDBCLSK891820.

Family and domain databases

InterProIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KOK01223.
PANTHERPTHR10353. Glyco_hydro_1. 1 hit.
PfamPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSPR00131. GLHYDRLASE1.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
PROSITEPS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB6I3V4_ECOSE
AccessionPrimary (citable) accession number: B6I3V4
Entry history
Integrated into UniProtKB/TrEMBL: December 16, 2008
Last sequence update: December 16, 2008
Last modified: December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)