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B6I3N6 (B6I3N6_ECOSE) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:ECSE_3939
OrganismEscherichia coli (strain SE11) [Complete proteome] [HAMAP]
Taxonomic identifier409438 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length772 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
B6I3N6 [UniParc].

Last modified December 16, 2008. Version 1.
Checksum: A7E39574FA5ED886

FASTA77287,971
        10         20         30         40         50         60 
MKISDGNWLI QPGLNLIHPL QVFEVEQQGN EMVVYAAPRD VRERTWQLDT PLFTLRFFSP 

        70         80         90        100        110        120 
QEGIVGVRIE HFQGALNNGP HYPLNILQDV KVTIENTERY AEFKSGNLSA RVSKGEFWSL 

       130        140        150        160        170        180 
DFLRNGERIT GSQVKNNGYV QDTNNQRNYM FERLDLGVGE TVYGLGERFT ALVRNGQTVE 

       190        200        210        220        230        240 
TWNRDGGTST EQAYKNIPFY MTNRGYGVLV NHPQCVSFEV GSEKVSKVQF SVESEYLEYF 

       250        260        270        280        290        300 
VIDGPTPKAV LDRYTRFTGR PALPPAWSFG LWLTTSFTTN YDEATVNSFI DGMAERNLPL 

       310        320        330        340        350        360 
HVFHFDCFWM KAFQWCDFEW DPLTFPDPEG MIRRLKAKGL KICVWINPYI GQKSPVFKEL 

       370        380        390        400        410        420 
QEKGYLLKRP DGSLWQWDKW QPGLAIYDFT NPDACKWYAD KLKGLVAMGV DCFKTDFGER 

       430        440        450        460        470        480 
IPTDVQWFDG SDPQKMHNHY AYIYNELVWN VLKDTVGEEE AVLFARSASV GAQKFPVHWG 

       490        500        510        520        530        540 
GDCYANYESM AESLRGGLSI GLSGFGFWSH DIGGFENTAP AHVYKRWCAF GLLSSHSRLH 

       550        560        570        580        590        600 
GSKSYRVPWA YDDESCDVVR FFTQLKCRMM PYLYREAARA NARGTPMMRA MMMEFPDDPA 

       610        620        630        640        650        660 
CDYLDRQYML GDNVMVAPVF TEAGDVQFYL PEGRWTHLWH NDELDGSRWH KQQHGFLSLP 

       670        680        690        700        710        720 
VYVRDNTLLA LGNNDQRPDY AWHEGTAFQL FNLQDGHEAV CEVPAADGSV IFTLKATRTG 

       730        740        750        760        770 
NTITVTGAGE ARNWTLCLRN IVKVNGLQGG SQAEGEQGLV VTPQGNTLTI TL 

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References

[1]"Complete genome sequence and comparative analysis of the wild-type commensal Escherichia coli strain SE11 isolated from a healthy adult."
Oshima K., Toh H., Ogura Y., Sasamoto H., Morita H., Park S.-H., Ooka T., Iyoda S., Taylor T.D., Hayashi T., Itoh K., Hattori M.
DNA Res. 15:375-386(2008) [PubMed: 18931093] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP009240 Genomic DNA. Translation: BAG79463.1.
RefSeqYP_002295214.1. NC_011415.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGB6I3N6.

Protein family/group databases

CAZyGH31. Glycoside Hydrolase Family 31.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBESCT00000106907; EBESCP00000100203; EBESCG00000107120.
GeneID7002324.
GenomeReviewsGene locus ECSE_3939 in contig AP009240_GR.
KEGGecy:ECSE_3939.
PATRIC18426522. VBIEscCol83070_4112.

Organism-specific databases

CMRSearch...

Phylogenomic databases

GeneTreeEBGT00050000011402.
HOGENOMHBG312625.
OMAQYMLGDS.
ProtClustDBPRK10658.

Family and domain databases

InterProIPR013785. Aldolase_TIM.
IPR011013. Glyco_hydro-type_carb-bd.
IPR000322. Glyco_hydro_31.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 2 hits.
KOK01811.
PANTHERPTHR22762. Glyco_hydro_31. 1 hit.
PfamPF01055. Glyco_hydro_31. 1 hit.
[Graphical view]
SUPFAMSSF74650. Gal_mut_like. 1 hit.
SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB6I3N6_ECOSE
AccessionPrimary (citable) accession number: B6I3N6
Entry history
Integrated into UniProtKB/TrEMBL: December 16, 2008
Last sequence update: December 16, 2008
Last modified: December 14, 2011
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)