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B6HK40 (B6HK40_PENCW) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length990 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Sequences

Sequence LengthMass (Da)Tools
B6HK40 [UniParc].

Last modified December 16, 2008. Version 1.
Checksum: 4ED51FADC197051E

FASTA990113,516
        10         20         30         40         50         60 
MDSDEILGQD DVLKPEQEED LDEKYPNRPH NRAPTLPFHD LYLDLFNPLS ELKKKPSGPA 

        70         80         90        100        110        120 
PARRKAGPHG KGATSLNPFE RRRDVIERFI SRWRKDVGDD IYPALRLILP DKDRDRPMYG 

       130        140        150        160        170        180 
IKEKAIGRML VKIMKINKES EDGYNLLNWK LPGQGATTRM AGDFARRCFD VLSKRPMRTD 

       190        200        210        220        230        240 
PGDMTIEEVN EKLDKLSAAS KEDEQLPILT EFYRRMNPEE LLWLIRIILR QMKVGATERT 

       250        260        270        280        290        300 
FFDVWHPDAE NLYSISSSLR RVCWELHDPN IRLEGEERGI ALMQCFQPQL AQFQMHSFER 

       310        320        330        340        350        360 
IIARMKPTED DNVFWIEEKM DGERMQLHMA PDDSTKGGRK FGFWSRKAKE YTYLYGNGIY 

       370        380        390        400        410        420 
DENGALTRHL KDAFVDGVQS IILDGEMITW DPEQDAMVPF GTLKTAALAE QRNPFSNGPR 

       430        440        450        460        470        480 
PLFRVFDILH LNGRDLTKYT LRDRRNALEK TVRPVHRRFE IHSYEEATTT TEVEAALRKV 

       490        500        510        520        530        540 
VAEASEGLVL KNPRSPYRLN ERHDDWMKVK PDYMTEFGES LDVIVIGGYY GSGRRGGALS 

       550        560        570        580        590        600 
SFLCGLRVDD STQAAEKCWS FCKVGGGFTA ADYQEVRHHT DGKWKAWDAK KPPTTFVELA 

       610        620        630        640        650        660 
GGDAQHERPD MWIKPSDSIV LCVKAASVAI SDQFRMGLAL RFPRFKKLRK DKDWKTALSV 

       670        680        690        700        710        720 
QEFLDLKSNA EQEHREKEFS VDNSRKKRVK RATKKPLTVA GHEDNVDVQY LGPSGHVFDE 

       730        740        750        760        770        780 
LNFFIMTEST VPEKKTKLQL EQLVKANGGK IYQTKTAAVD TLCVAERRTV KVASLQKSGE 

       790        800        810        820        830        840 
QNIIRPSWLI DCVKQNEIDA GLPDLLLPFE PRHMFFMTEE KEEEVAANVD KFMDSYARDT 

       850        860        870        880        890        900 
TVNELKDADD VPDPETTQRI ETRIQERVNA GYTVPVGWLF RGLKFHFYSN GNQPDESASR 

       910        920        930        940        950        960 
EIRREDQRLQ FARNTARFAA AEIAKTLKSS GITHVIVDPE TVSSADKTSL RNTLAAKPGA 

       970        980        990 
KMPHLVSVGW VEECWKNGTL LDEERFPILR 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM920436 Genomic DNA. Translation: CAP95614.1.
RefSeqXP_002567758.1. XM_002567712.1.

3D structure databases

ProteinModelPortalB6HK40.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING500485.B6HK40.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8314155.
KEGGpcs:Pc21g07170.

Phylogenomic databases

eggNOGCOG1793.
KOK10777.
OMAHMCPSTK.
OrthoDBEOG7QC84G.

Enzyme and pathway databases

BioCycPCHR:PC21G07170-MONOMER.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
3.40.50.10190. 2 hits.
InterProIPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF00533. BRCT. 1 hit.
PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SMARTSM00292. BRCT. 2 hits.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 2 hits.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS50172. BRCT. 2 hits.
PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB6HK40_PENCW
AccessionPrimary (citable) accession number: B6HK40
Entry history
Integrated into UniProtKB/TrEMBL: December 16, 2008
Last sequence update: December 16, 2008
Last modified: December 11, 2013
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)