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B6H3T7 (B6H3T7_PENCW) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length833 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m). RuleBase RU000617

Sequence similarities

Belongs to the ATP-dependent DNA ligase family.

Sequences

Sequence LengthMass (Da)Tools
B6H3T7 [UniParc].

Last modified December 16, 2008. Version 1.
Checksum: F5363BFE2ACCB776

FASTA83392,799
        10         20         30         40         50         60 
MPSPAKKRKR NGDSSQPTRS IKSFFKEQTT EQTNSIVPDV TEQTLSDEAL ARKLQAEWTE 

        70         80         90        100        110        120 
QGNNNTPTED TKGALQVNTV PSTLDSPVPP PVAPVIPKKS TLSLQSSAGT EDTISLAISL 

       130        140        150        160        170        180 
DQSPQTFDAS QYAAEMRSHW ATEGGDASYA LLTRAFVLAN ATTSRIRIVD TLVNFLRVLI 

       190        200        210        220        230        240 
EGDPSSVLPA VWLATNSISP PYDELELGLG GSSISKALKK IYGLNNQGLK TLYDKHGDAG 

       250        260        270        280        290        300 
DVAFEAKKRQ SFTLVKPKPL RIKGVYQSLK KIATSKGPGS QETKQRIVEK LLQDARGAEE 

       310        320        330        340        350        360 
SRYIVRTLVQ NLRIGAVKTT MLIALARAVL YSKPVGADFE VRPPNQLARL KKDELAEIYS 

       370        380        390        400        410        420 
SAEEIVKASY ARHPNYNDLV PCLLEIGPTE ELLIRCGLSM HIPLRPMLGS ITRDLSEMLT 

       430        440        450        460        470        480 
KLQGRDFSCE YKYDGQRAQV HCDEQGTVSI FSRHLELMTE KYPDLVSLVP QIRGEGVSSF 

       490        500        510        520        530        540 
ILEGEVVAVD RETGDLKPFQ VLTNRAKKNV EIGDIKVNVC LFAFDLMYLN GEPLLDRPFR 

       550        560        570        580        590        600 
ERRELLRSLF VEIPRHFGWV KSMDATSADS ESVLEFFKSA IDVKCEGIMV KLLDNKPSAN 

       610        620        630        640        650        660 
TQQVNNKLSD EIAAITTEQP NQAIYDPITN PNPKAKPTRR KPLLSTYEPD KRLESWLKVK 

       670        680        690        700        710        720 
KDYSTSSETL DLIPIAGWHG QGRKAKWWSP ILMAVRNPET GSLEAVTKCM SGFTDKFYQS 

       730        740        750        760        770        780 
NKEKYAQGST NVISRPSYIE YPGEPDVWFD PSEVWEMAFA DITLSPTYPA AIGLVSDERG 

       790        800        810        820        830 
LSLRFPRFIK VREDKSIDEA TSSDYLALLW RKQMERTGDV AEVGDVSLEE GME 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM920428 Genomic DNA. Translation: CAP92006.1.
RefSeqXP_002559361.1. XM_002559315.1.

3D structure databases

ProteinModelPortalB6H3T7.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING500485.B6H3T7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8316064.
KEGGpcs:Pc13g09370.

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000036006.
KOK10747.
OMAFIMEGEV.
OrthoDBEOG7TXKRG.

Enzyme and pathway databases

BioCycPCHR:PC13G09370-MONOMER.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB6H3T7_PENCW
AccessionPrimary (citable) accession number: B6H3T7
Entry history
Integrated into UniProtKB/TrEMBL: December 16, 2008
Last sequence update: December 16, 2008
Last modified: December 11, 2013
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)