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B6ES81 (B6ES81_ALISL) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:VSAL_II0813 EMBL CAQ81567.1
OrganismAliivibrio salmonicida (strain LFI1238) (Vibrio salmonicida (strain LFI1238)) [Complete proteome] [HAMAP] EMBL CAQ81567.1
Taxonomic identifier316275 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio

Protein attributes

Sequence length459 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
B6ES81 [UniParc].

Last modified November 25, 2008. Version 1.
Checksum: B982F44F0DC00B37

FASTA45950,518
        10         20         30         40         50         60 
MSELLITPHF RSEGDVNTTL ARSLWNESLQ DESTQSLLTR DSNVFLHQAM STPCLDSLQG 

        70         80         90        100        110        120 
AEGVYLQDTR GKKYLDFHGN NVHQLGYGHP HVIKKVTEQI AKLPFSPRRF TNSIAIECAE 

       130        140        150        160        170        180 
KLTEICGGEL NRVLFAPGGT SIIGMALKLA RHITGNFKVV SLWDSFHGAS LDAISVGGEA 

       190        200        210        220        230        240 
CFREGMGPLL AGVERIPPAV TYRGAFPSSD GSDVHYADYL EYVIEKEGGI GVFIAEAVRN 

       250        260        270        280        290        300 
TDVQVPSKAY WKRIREICDK HNVLLIIDDI PNGMGRSGEW FTHQAYDIEP DILCIGKGLG 

       310        320        330        340        350        360 
GGLIPIAAMI TKDKYNTAAN VSLGHYTHEK SPVGCAAALA VMETIEQNNL LEKVRHDGQF 

       370        380        390        400        410        420 
IHHYLNTMKA KYQVIGDVRG IGLLWGVELV TSPITKTRAF DEAEAVLYQC LNDGLSFKVS 

       430        440        450 
QGNVIQLSPP LIISREELTQ ALIIFEQAIA KVCKDFNYV 

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References

[1]"The genome sequence of the fish pathogen Aliivibrio salmonicida strain LFI1238 shows extensive evidence of gene decay."
Hjerde E., Lorentzen M.S., Holden M.T., Seeger K., Paulsen S., Bason N., Churcher C., Harris D., Norbertczak H., Quail M.A., Sanders S., Thurston S., Parkhill J., Willassen N.P., Thomson N.R.
BMC Genomics 9:616-616(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: LFI1238 EMBL CAQ81567.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FM178380 Genomic DNA. Translation: CAQ81567.1.
RefSeqYP_002265119.1. NC_011313.1.

3D structure databases

ProteinModelPortalB6ES81.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING316275.VSAL_II0813.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAQ81567; CAQ81567; VSAL_II0813.
GeneID6962162.
KEGGvsa:VSAL_II0813.
PATRIC20858428. VBIAliSal95923_4173.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0160.
HOGENOMHOG000020206.
KOK00823.
OMALPEGYMA.
OrthoDBEOG6QVRHN.
ProtClustDBPRK06082.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11986. PTHR11986. 1 hit.
PfamPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMSSF53383. SSF53383. 1 hit.
PROSITEPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB6ES81_ALISL
AccessionPrimary (citable) accession number: B6ES81
Entry history
Integrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: April 16, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)