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Protein
Submitted name:

Putative response regulator

Gene

VSAL_II0329

Organism
Aliivibrio salmonicida (strain LFI1238) (Vibrio salmonicida (strain LFI1238))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro

GO - Biological processi

  1. phosphorelay signal transduction system Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative response regulatorImported
Gene namesi
Ordered Locus Names:VSAL_II0329Imported
OrganismiAliivibrio salmonicida (strain LFI1238) (Vibrio salmonicida (strain LFI1238))Imported
Taxonomic identifieri316275 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio
ProteomesiUP000001730 Componenti: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi316275.VSAL_II0329.

Structurei

3D structure databases

ProteinModelPortaliB6EQV5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0745.
HOGENOMiHOG000291805.
OMAiINKVELM.
OrthoDBiEOG69GZGV.

Family and domain databases

InterProiIPR011006. CheY-like_superfamily.
IPR001932. PP2C-like_dom.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamiPF00072. Response_reg. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF52172. SSF52172. 1 hit.
SSF81606. SSF81606. 1 hit.
PROSITEiPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B6EQV5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEYILVVDDD PVSLLFMSSL LKRCGFNIIS AKNGLEAMSI LAENPHIQFV
60 70 80 90 100
LSDWIMPEMD GIELCTKLKE IEFDRYIFFV LLSGKNDQRS IIDGINAGAD
110 120 130 140 150
DFIVKGADVK ELEARVKAGF RTLELHNKIT DKNQELDSAY ATIRKDLDAA
160 170 180 190 200
GDLVRQLLPT QTNFTGVELN YISIPSAQIG GDMLGYMQLD PDHLAFYLFD
210 220 230 240 250
VAGHGVSSAL MSFSVQQSLS VIDGPSSIVK DVNNKIIPPE EVIDKLNKLY
260 270 280 290 300
ISDDKIQLYF TIVYAVLNVK TGEVNYCSAG HPPLVWLHQK TEQAELVGHD
310 320 330 340 350
NFVVGAFDFV EYQSASIQLD PGDKIWLYSD GITEAEKDNI QFSEDGLRKT
360 370 380 390 400
IMDIRSHPTH LQTELLVNRV RTWHESDTFE DDVSVLAVGW KGYSKQEDDS
410
CNTKLTTKVN AQFFR
Length:415
Mass (Da):46,607
Last modified:November 25, 2008 - v1
Checksum:iF6C537622E1E946A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FM178380 Genomic DNA. Translation: CAQ81083.1.
RefSeqiYP_002264672.1. NC_011313.1.

Genome annotation databases

EnsemblBacteriaiCAQ81083; CAQ81083; VSAL_II0329.
KEGGivsa:VSAL_II0329.
PATRICi20857416. VBIAliSal95923_3672.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FM178380 Genomic DNA. Translation: CAQ81083.1.
RefSeqiYP_002264672.1. NC_011313.1.

3D structure databases

ProteinModelPortaliB6EQV5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi316275.VSAL_II0329.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAQ81083; CAQ81083; VSAL_II0329.
KEGGivsa:VSAL_II0329.
PATRICi20857416. VBIAliSal95923_3672.

Phylogenomic databases

eggNOGiCOG0745.
HOGENOMiHOG000291805.
OMAiINKVELM.
OrthoDBiEOG69GZGV.

Family and domain databases

InterProiIPR011006. CheY-like_superfamily.
IPR001932. PP2C-like_dom.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamiPF00072. Response_reg. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF52172. SSF52172. 1 hit.
SSF81606. SSF81606. 1 hit.
PROSITEiPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of the fish pathogen Aliivibrio salmonicida strain LFI1238 shows extensive evidence of gene decay."
    Hjerde E., Lorentzen M.S., Holden M.T., Seeger K., Paulsen S., Bason N., Churcher C., Harris D., Norbertczak H., Quail M.A., Sanders S., Thurston S., Parkhill J., Willassen N.P., Thomson N.R.
    BMC Genomics 9:616-616(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: LFI1238Imported.

Entry informationi

Entry nameiB6EQV5_ALISL
AccessioniPrimary (citable) accession number: B6EQV5
Entry historyi
Integrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: April 29, 2015
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.