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B6EQV5 (B6EQV5_ALISL) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:VSAL_II0329 EMBL CAQ81083.1
OrganismAliivibrio salmonicida (strain LFI1238) (Vibrio salmonicida (strain LFI1238)) [Complete proteome] [HAMAP] EMBL CAQ81083.1
Taxonomic identifier316275 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio

Protein attributes

Sequence length415 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
B6EQV5 [UniParc].

Last modified November 25, 2008. Version 1.
Checksum: F6C537622E1E946A

FASTA41546,607
        10         20         30         40         50         60 
MEYILVVDDD PVSLLFMSSL LKRCGFNIIS AKNGLEAMSI LAENPHIQFV LSDWIMPEMD 

        70         80         90        100        110        120 
GIELCTKLKE IEFDRYIFFV LLSGKNDQRS IIDGINAGAD DFIVKGADVK ELEARVKAGF 

       130        140        150        160        170        180 
RTLELHNKIT DKNQELDSAY ATIRKDLDAA GDLVRQLLPT QTNFTGVELN YISIPSAQIG 

       190        200        210        220        230        240 
GDMLGYMQLD PDHLAFYLFD VAGHGVSSAL MSFSVQQSLS VIDGPSSIVK DVNNKIIPPE 

       250        260        270        280        290        300 
EVIDKLNKLY ISDDKIQLYF TIVYAVLNVK TGEVNYCSAG HPPLVWLHQK TEQAELVGHD 

       310        320        330        340        350        360 
NFVVGAFDFV EYQSASIQLD PGDKIWLYSD GITEAEKDNI QFSEDGLRKT IMDIRSHPTH 

       370        380        390        400        410 
LQTELLVNRV RTWHESDTFE DDVSVLAVGW KGYSKQEDDS CNTKLTTKVN AQFFR 

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References

[1]"The genome sequence of the fish pathogen Aliivibrio salmonicida strain LFI1238 shows extensive evidence of gene decay."
Hjerde E., Lorentzen M.S., Holden M.T., Seeger K., Paulsen S., Bason N., Churcher C., Harris D., Norbertczak H., Quail M.A., Sanders S., Thurston S., Parkhill J., Willassen N.P., Thomson N.R.
BMC Genomics 9:616-616(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: LFI1238 EMBL CAQ81083.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FM178380 Genomic DNA. Translation: CAQ81083.1.
RefSeqYP_002264672.1. NC_011313.1.

3D structure databases

ProteinModelPortalB6EQV5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING316275.VSAL_II0329.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAQ81083; CAQ81083; VSAL_II0329.
GeneID6961784.
KEGGvsa:VSAL_II0329.
PATRIC20857416. VBIAliSal95923_3672.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0745.
HOGENOMHOG000291805.
OMALNHAFQM.
OrthoDBEOG69GZGV.
ProtClustDBCLSK913339.

Family and domain databases

InterProIPR011006. CheY-like_superfamily.
IPR001932. PP2C-like_dom.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamPF00072. Response_reg. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTSM00331. PP2C_SIG. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMSSF52172. SSF52172. 1 hit.
SSF81606. SSF81606. 1 hit.
PROSITEPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB6EQV5_ALISL
AccessionPrimary (citable) accession number: B6EQV5
Entry history
Integrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: April 16, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)