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B6EQT4 (B6EQT4_ALISL) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:VSAL_II0308 EMBL CAQ81062.1
OrganismAliivibrio salmonicida (strain LFI1238) (Vibrio salmonicida (strain LFI1238)) [Complete proteome] [HAMAP] EMBL CAQ81062.1
Taxonomic identifier316275 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio

Protein attributes

Sequence length506 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
B6EQT4 [UniParc].

Last modified November 25, 2008. Version 1.
Checksum: 007D18204FAC8BAF

FASTA50657,022
        10         20         30         40         50         60 
MTDSILLFEN IQPTSLEAIR VLRLSLSKIL DRLDVQKTVK NPCLLCFSEW STNLVLHPKN 

        70         80         90        100        110        120 
PSKSITIALR KTKHHWQLDI IDDGEAWDPT AQPSNTDIGD FSLKCGGRGI DIIQSQTNTT 

       130        140        150        160        170        180 
AYHSFDTHNL FSMTWIRENH QKRPHILIVE DDVIQCKLYS AYLNQQFDIT LTNNGKEALD 

       190        200        210        220        230        240 
FLKNNTVDLI VSDIQMPKMG GLELRQHLEQ DKDISIPFIF LSHLQDTTTV NSAVDLGIDD 

       250        260        270        280        290        300 
YLEKPIKKDQ LLYTIQRVLA RFNQVYQSLS KQVNQKITHT LLPQIEIHSP HWKLAIQQRN 

       310        320        330        340        350        360 
TGHGGGDFVL SMDDDDITQI LLADVMGHDE SAKFFAYAYA GYIRGLMQNS DLKHPAQLLS 

       370        380        390        400        410        420 
TLSNNAFKDQ ILSQTMLTSC CVSLLNSNTL AISSAGHPPP IHITNRGLSI INVEGTLPGL 

       430        440        450        460        470        480 
LPNTTYQETK ITLQQKERIA FFTDGLFESG DSLSERETLE KAVKQQLINT FDLPIESAME 

       490        500 
QIMQTFDSLA GTPPNDDALL LIIEKQ 

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References

[1]"The genome sequence of the fish pathogen Aliivibrio salmonicida strain LFI1238 shows extensive evidence of gene decay."
Hjerde E., Lorentzen M.S., Holden M.T., Seeger K., Paulsen S., Bason N., Churcher C., Harris D., Norbertczak H., Quail M.A., Sanders S., Thurston S., Parkhill J., Willassen N.P., Thomson N.R.
BMC Genomics 9:616-616(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: LFI1238 EMBL CAQ81062.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FM178380 Genomic DNA. Translation: CAQ81062.1.
RefSeqYP_002264651.1. NC_011313.1.

3D structure databases

ProteinModelPortalB6EQT4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING316275.VSAL_II0308.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAQ81062; CAQ81062; VSAL_II0308.
GeneID6961764.
KEGGvsa:VSAL_II0308.
PATRIC20857374. VBIAliSal95923_3651.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3947.
HOGENOMHOG000073300.
OMAREHISAI.
OrthoDBEOG6G4VQG.
ProtClustDBCLSK937045.

Family and domain databases

InterProIPR011006. CheY-like_superfamily.
IPR003594. HATPase_ATP-bd.
IPR001932. PP2C-like_dom.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamPF13581. HATPase_c_2. 1 hit.
PF00072. Response_reg. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTSM00331. PP2C_SIG. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMSSF52172. SSF52172. 1 hit.
SSF81606. SSF81606. 1 hit.
PROSITEPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB6EQT4_ALISL
AccessionPrimary (citable) accession number: B6EQT4
Entry history
Integrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: April 16, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)