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B6EQL7

- GLGA_ALISL

UniProt

B6EQL7 - GLGA_ALISL

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Protein

Glycogen synthase

Gene

glgA

Organism
Aliivibrio salmonicida (strain LFI1238) (Vibrio salmonicida (strain LFI1238))
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei20 – 201ADP-glucoseUniRule annotation

GO - Molecular functioni

  1. starch synthase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthaseUniRule annotation
Gene namesi
Name:glgAUniRule annotation
Ordered Locus Names:VSAL_II0239
OrganismiAliivibrio salmonicida (strain LFI1238) (Vibrio salmonicida (strain LFI1238))
Taxonomic identifieri316275 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio
ProteomesiUP000001730: Chromosome 2

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 482482Glycogen synthasePRO_1000126052Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi316275.VSAL_II0239.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiMAKRFTW.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

B6EQL7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MATKTLSILF AASEVEGLIK SGGLADVAKA LPKSLKDLGH EIHIAMPAYS
60 70 80 90 100
AIPERDDAEV LLSSTLEHWP HTPYQVRSLS VEGITVLGIE CADYFDRAEM
110 120 130 140 150
YAENNQAYAD NGERFAFFSA ACLDMLPKLK IKPDVIHAND WHTGLLPYLL
160 170 180 190 200
KKRYANDAYF SQVRSVLSVH NAVFKGIFHY DDIGCLSEFK THYVPEAAVS
210 220 230 240 250
HTHISMLKAG VQCADKINAV SPTYAKELLT ELGSHGMASD FQAREPDLFG
260 270 280 290 300
ILNGCDYSEW SPETDTFIPK QFKANRISMV RGKKVCKAAL QEEVGLPQKE
310 320 330 340 350
VAMYGMVCRL TNQKGIHYLL PILEQFLKHD LQIVIVGTGD PVLAAQLTEI
360 370 380 390 400
AAIHSDKFAF VEAYSNKLAH WIEASSDFFL MPSEFEPCGL NQIYSMSYGA
410 420 430 440 450
LPIVRAVGGL KDSVIDYDSD NENATGFSFI NPEPTELLLV LMRSLLLYAQ
460 470 480
DLNEVKRIQL HAMKQNFSWS DAAEKYVEMY LD
Length:482
Mass (Da):53,742
Last modified:November 25, 2008 - v1
Checksum:i33D0ECBC4FFCF2A5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FM178380 Genomic DNA. Translation: CAQ80993.1.
RefSeqiYP_002264589.1. NC_011313.1.

Genome annotation databases

EnsemblBacteriaiCAQ80993; CAQ80993; VSAL_II0239.
GeneIDi6961703.
KEGGivsa:VSAL_II0239.
PATRICi20857222. VBIAliSal95923_3575.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FM178380 Genomic DNA. Translation: CAQ80993.1 .
RefSeqi YP_002264589.1. NC_011313.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 316275.VSAL_II0239.

Protein family/group databases

CAZyi GT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAQ80993 ; CAQ80993 ; VSAL_II0239 .
GeneIDi 6961703.
KEGGi vsa:VSAL_II0239.
PATRICi 20857222. VBIAliSal95923_3575.

Phylogenomic databases

eggNOGi COG0297.
HOGENOMi HOG000294940.
KOi K00703.
OMAi MAKRFTW.
OrthoDBi EOG6JTC6Z.

Enzyme and pathway databases

UniPathwayi UPA00164 .

Family and domain databases

HAMAPi MF_00484. Glycogen_synth.
InterProi IPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view ]
Pfami PF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02095. glgA. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The genome sequence of the fish pathogen Aliivibrio salmonicida strain LFI1238 shows extensive evidence of gene decay."
    Hjerde E., Lorentzen M.S., Holden M.T., Seeger K., Paulsen S., Bason N., Churcher C., Harris D., Norbertczak H., Quail M.A., Sanders S., Thurston S., Parkhill J., Willassen N.P., Thomson N.R.
    BMC Genomics 9:616-616(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: LFI1238.

Entry informationi

Entry nameiGLGA_ALISL
AccessioniPrimary (citable) accession number: B6EQL7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: November 25, 2008
Last modified: October 29, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3