B6EPB9 (B6EPB9_ALISL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
3-deoxy-D-manno-octulosonic-acid transferase EMBL CAQ77847.1
EC=2.-.-.- EMBL CAQ77847.1

Gene names

Name:	kdtA EMBL CAQ77847.1
Ordered Locus Names:	VSAL_I0162 EMBL CAQ77847.1, VSAL_I0261 EMBL CAQ77946.1

Organism

Aliivibrio salmonicida (strain LFI1238) (Vibrio salmonicida (strain LFI1238)) [Complete proteome] [HAMAP] EMBL CAQ77847.1

Taxonomic identifier

316275 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Aliivibrio › Aliivibrio salmonicida

Protein attributes

Sequence length	420 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Transferase EMBL CAQ77847.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular_function	transferase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B6EPB9 [UniParc]. Last modified November 25, 2008. Version 1. Checksum: 79592E6C70714D6E	FASTA	420	46,585
	10 20 30 40 50 60 MLIRLVYTLL LTLLSPVLLF GLYKKKPNKP QFGDRWKEHF GFTPTLKKSE QPLWIHAVSV 70 80 90 100 110 120 GEAIAATPLI KALKQQSPEQ PILVTTTTST GAEQIAKLGD LVEHRYMPID FPFAVNGFLK 130 140 150 160 170 180 TVNPSKLLII ETELWPNTLH SVGKSNIPIY VVNARLSEKS CQGYTKIQPV FTELSKHLTK 190 200 210 220 230 240 VLCQTQADAD RFARLGINKE RLCATGSIKF DIQISDEIKQ QGQELRQLLD NDRPIWIAAS 250 260 270 280 290 300 THKGEDEQVL DAHKEVLKEH PNALLILVPR HPERFDTVFE LSKNSGFSSI RRTSNKTVTA 310 320 330 340 350 360 ETQVYLGDTM GEMLVLIGAA DVCFMGGSLL GDKVGGHNVL EPAALGVPVI IGPSYYNFKE 370 380 390 400 410 420 IVDTLRGEQG IVICEPTQLS NHIVKLIDDS TEYQLLQNSA SNVVQSNQGA LNRTIAISNI

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The genome sequence of the fish pathogen Aliivibrio salmonicida strain LFI1238 shows extensive evidence of gene decay." Hjerde E., Lorentzen M.S., Holden M.T., Seeger K., Paulsen S., Bason N., Churcher C., Harris D., Norbertczak H., Quail M.A., Sanders S., Thurston S., Parkhill J., Willassen N.P., Thomson N.R. BMC Genomics 9:616-616(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: LFI1238 EMBL CAQ77847.1.
[2]	"The complete genome sequence of the fish pathogen Aliivibrio salmonicida strain LFI1238." Hjerde E., Lorentzen M.S., Holden M.T.G., Seeger K., Paulsen S., Bason N., Churcher C., Harris D., Norbertczak H., Quail M.A., Sanders S., Thurston S., Parkhill J., Willassen N.-P., Thomson N.R. Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: LFI1238.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FM178379 Genomic DNA. Translation: CAQ77847.1. FM178379 Genomic DNA. Translation: CAQ77946.1.
RefSeq	YP_002261708.1. NC_011312.1. YP_002261797.1. NC_011312.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	316275.VSAL_I0261.
Protein family/group databases
CAZy	GT30. Glycosyltransferase Family 30.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAQ77847; CAQ77847; VSAL_I0162. CAQ77946; CAQ77946; VSAL_I0261.
GeneID	6986402. 6989088.
KEGG	vsa:VSAL_I0162. vsa:VSAL_I0261.
PATRIC	20850351. VBIAliSal95923_0249.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1519.
HOGENOM	HOG000257156.
KO	K02527.
OMA	KHGGHNP.
ProtClustDB	PRK05749.
Family and domain databases
InterPro	IPR001296. Glyco_trans_1. IPR007507. Glycos_transf_N. [Graphical view]
Pfam	PF00534. Glycos_transf_1. 1 hit. PF04413. Glycos_transf_N. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B6EPB9_ALISL

Accession

Primary (citable) accession number: B6EPB9

Entry history

Integrated into UniProtKB/TrEMBL:	November 25, 2008
Last sequence update:	November 25, 2008
Last modified:	May 1, 2013
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)