B6EPA5 (B6EPA5_ALISL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Thioredoxin PIRNR PIRNR000077

Gene names

Name:	trxA EMBL CAQ77832.1
Ordered Locus Names:	VSAL_I0147

Organism

Aliivibrio salmonicida (strain LFI1238) (Vibrio salmonicida (strain LFI1238)) [Complete proteome] [HAMAP] EMBL CAQ77832.1

Taxonomic identifier

316275 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Aliivibrio

Protein attributes

Sequence length	108 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the thioredoxin family. PIRNR PIRNR000077

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell redox homeostasis Inferred from electronic annotation. Source: InterPro glycerol ether metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	electron carrier activity Inferred from electronic annotation. Source: InterPro protein disulfide oxidoreductase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Amino acid modifications
	Disulfide bond	33 ↔ 36		Redox-active By similarity PIRSR PIRSR000077-4

Sequences

	Sequence		Length	Mass (Da)
	B6EPA5 [UniParc]. Last modified November 25, 2008. Version 1. Checksum: E383B8FCD305CBE8	FASTA	108	11,638
	10 20 30 40 50 60 MSDKILQLTD DGFEESVINA SGPVLVDFWA EWCGPCKMIA PILDEIADEY EGKLTIGKLN 70 80 90 100 IDQNAGTPPK FGIRGIPTLL LFKDGGVAAT KVGALSKTQL KEFLDANL

References

[1]

"The complete genome sequence of the fish pathogen Aliivibrio salmonicida strain LFI1238." Hjerde E., Lorentzen M.S., Holden M.T.G., Seeger K., Paulsen S., Bason N., Churcher C., Harris D., Norbertczak H., Quail M.A., Sanders S., Thurston S., Parkhill J., Willassen N.-P., Thomson N.R. Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	FM178379 Genomic DNA. Translation: CAQ77832.1.
RefSeq	YP_002261696.1. NC_011312.1.
3D structure databases
ProteinModelPortal	B6EPA5.
ModBase	Search...
Protein-protein interaction databases
STRING	B6EPA5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6989092.
GenomeReviews	Gene locus VSAL_I0147 in contig FM178379_GR.
KEGG	vsa:VSAL_I0147.
PATRIC	20850319. VBIAliSal95923_0233.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG493509.
OMA	DEGFEND.
ProtClustDB	CLSK873930.
Family and domain databases
InterPro	IPR005746. Thioredoxin. IPR012336. Thioredoxin-like_fold. IPR017937. Thioredoxin_CS. IPR013766. Thioredoxin_domain. [Graphical view]
Gene3D	G3DSA:3.40.30.10. Thioredoxin_fold. 1 hit.
KO	K03671.
PANTHER	PTHR10438. Trx. 1 hit.
Pfam	PF00085. Thioredoxin. 1 hit. [Graphical view]
PIRSF	PIRSF000077. Thioredoxin. 1 hit.
PRINTS	PR00421. THIOREDOXIN.
SUPFAM	SSF52833. Thiordxn-like_fd. 1 hit.
TIGRFAMs	TIGR01068. Thioredoxin. 1 hit.
PROSITE	PS00194. THIOREDOXIN_1. 1 hit. PS51352. THIOREDOXIN_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B6EPA5_ALISL

Accession

Primary (citable) accession number: B6EPA5

Entry history

Integrated into UniProtKB/TrEMBL:	November 25, 2008
Last sequence update:	November 25, 2008
Last modified:	December 14, 2011
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)