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Protein

Aminotransferase

Gene

aspC

Organism
Aliivibrio salmonicida (strain LFI1238) (Vibrio salmonicida (strain LFI1238))
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseUniRule annotationImported, Transferase

Names & Taxonomyi

Protein namesi
Recommended name:
AminotransferaseUniRule annotation (EC:2.6.1.-UniRule annotation)
Gene namesi
Name:aspCImported
Ordered Locus Names:VSAL_I1687Imported
OrganismiAliivibrio salmonicida (strain LFI1238) (Vibrio salmonicida (strain LFI1238))Imported
Taxonomic identifieri316275 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio
Proteomesi
  • UP000001730 Componenti: Chromosome 1

Interactioni

Protein-protein interaction databases

STRINGi316275.VSAL_I1687.

Structurei

3D structure databases

ProteinModelPortaliB6EMI6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini30 – 394365Aminotran_1_2InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CGF. Bacteria.
COG1448. LUCA.
HOGENOMiHOG000185899.
KOiK00832.
OMAiPNHKGVF.
OrthoDBiPOG091H00HU.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR000796. Asp_trans.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11879. PTHR11879. 1 hit.
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
PRINTSiPR00799. TRANSAMINASE.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B6EMI6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMTMFEKISA APADPILGLT DEFKNDPRAE KINLGVGIYK NEAGQTPVLK
60 70 80 90 100
TVKKAEAVLL DTEKTKSYLT IQGTAEYGLA VQKLLFGNNA DVITEKRTQT
110 120 130 140 150
AQAPGGTGAL RVAGEFIKRQ LGNVKIWISN PTWANHIGVF TAAGIETAQY
160 170 180 190 200
SYYNAETKSK DFAAMMADLQ QAESGDVVLL HGCCHNPTGI DPTDAEWEEL
210 220 230 240 250
AKLCANKGLL PLFDFAYQGF AKGVEEDASG LRTFAQYCPE LLVASSFSKN
260 270 280 290 300
FGLYNERVGA FTLVAKDPEV SVTAFSQVKA IIRSIYSNPP AHGAAVVTYI
310 320 330 340 350
LNDDALRTEW EQEVQEMRAR IQEMRTLFVT TLKEQGVDAN FSFIERQNGM
360 370 380 390
FSFSGLSKEQ VNRLKDEFAI YIVGSGRISV AGMTKDNMLP LCKGIAAVL
Length:399
Mass (Da):43,662
Last modified:November 25, 2008 - v1
Checksum:i3D0B34F97F5F0C52
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FM178379 Genomic DNA. Translation: CAQ79372.1.

Genome annotation databases

EnsemblBacteriaiCAQ79372; CAQ79372; VSAL_I1687.
KEGGivsa:VSAL_I1687.
PATRICi20853656. VBIAliSal95923_1849.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FM178379 Genomic DNA. Translation: CAQ79372.1.

3D structure databases

ProteinModelPortaliB6EMI6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi316275.VSAL_I1687.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAQ79372; CAQ79372; VSAL_I1687.
KEGGivsa:VSAL_I1687.
PATRICi20853656. VBIAliSal95923_1849.

Phylogenomic databases

eggNOGiENOG4105CGF. Bacteria.
COG1448. LUCA.
HOGENOMiHOG000185899.
KOiK00832.
OMAiPNHKGVF.
OrthoDBiPOG091H00HU.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR000796. Asp_trans.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11879. PTHR11879. 1 hit.
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
PRINTSiPR00799. TRANSAMINASE.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB6EMI6_ALISL
AccessioniPrimary (citable) accession number: B6EMI6
Entry historyi
Integrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: September 7, 2016
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.