B6EL16 (B6EL16_ALISL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Chitobiose phosphorylase (Glycosyl transferase) EMBL CAQ80268.1
EC=2.4.1.- EMBL CAQ80268.1

Gene names

Name:	chbP EMBL CAQ80268.1
Ordered Locus Names:	VSAL_I2584

Organism

Aliivibrio salmonicida (strain LFI1238) (Vibrio salmonicida (strain LFI1238)) [Complete proteome] [HAMAP] EMBL CAQ80268.1

Taxonomic identifier

316275 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Aliivibrio

Protein attributes

Sequence length	762 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosyltransferase EMBL CAQ80268.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro sphingolipid metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	integral to membrane Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro glucosylceramidase activity Inferred from electronic annotation. Source: InterPro transferase activity, transferring glycosyl groups Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B6EL16 [UniParc]. Last modified November 25, 2008. Version 1. Checksum: A59DB29A3A005E2A	FASTA	762	86,213
	10 20 30 40 50 60 MKYGFFDNDN REYVITRPDV PAPWTNYLGT EKFCTVISHN AGGYSFYNSP EYNRVTKFRP 70 80 90 100 110 120 NGTFDRPGHY VYLRDDETGD YWSISWQPVA KSLDEASYEV RHGLSYSKFK CDYNGIEATK 130 140 150 160 170 180 TLFVPKGEDA EVWDVVIKNT SDKPRVISAF SFVEFSFSHI QSDNQNHQMS LYSAGTSYTE 190 200 210 220 230 240 GVIECDLYYN TNDFEGFYYL ASTFDPDLYD GQRDTFLGAY RDEANPIAVE KGQCSNSAQT 250 260 270 280 290 300 CYNHCGSLHK QFTIQPGEEV RFAYVLGLGK GNGDRLRKKY QDVANVDAAF QEIKDHWSER 310 320 330 340 350 360 CEKFQVKSPN EGLDTMINTW TLYQAETCVV WSRFASFIEV GGRTGLGYRD TAQDAISVPH 370 380 390 400 410 420 SNPEMTRKRI VDLLRGQVKA GYGLHLFDPD WFDPEKADVV PSKSPTVVPT PSDDDKIHCI 430 440 450 460 470 480 EDTCSDDHLW IVPTIIKYVM ETGEHSFFDE VIPYADGGDA TVYEHMKAAL DFSAEYVGRT 490 500 510 520 530 540 GICKGLRADW NDCLNLGGGE SSMVSFLHFW ALEEFLDLAK FHKNDADISK YSEMAANVRE 550 560 570 580 590 600 ACETHLWDEE GGWYIRGLTK DGDKIGTAQQ TEGRVHLESN TLAVLSGAVS QERGEKAMDA 610 620 630 640 650 660 VDENLFSEYG LHLNSPSFST PNDDIGFVTR VYQGVKENGA IFSHPNPWAW VAEAKLGRGD 670 680 690 700 710 720 RAMKFYDALN PYNQNDMIEK RIAEPYSYVQ FIMGKDHQDH GRANHPWLTG TSGWAYFAVT 730 740 750 760 NFILGVRAGF EGLTIDPCIP TDWPEFSVSR QWRSASPSGR QC

References

[1]

"The complete genome sequence of the fish pathogen Aliivibrio salmonicida strain LFI1238." Hjerde E., Lorentzen M.S., Holden M.T.G., Seeger K., Paulsen S., Bason N., Churcher C., Harris D., Norbertczak H., Quail M.A., Sanders S., Thurston S., Parkhill J., Willassen N.-P., Thomson N.R. Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	FM178379 Genomic DNA. Translation: CAQ80268.1.
RefSeq	YP_002263930.1. NC_011312.1.
3D structure databases
ProteinModelPortal	B6EL16.
ModBase	Search...
Protein-protein interaction databases
STRING	B6EL16.
Protein family/group databases
CAZy	GH94. Glycoside Hydrolase Family 94.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6988462.
GenomeReviews	Gene locus VSAL_I2584 in contig FM178379_GR.
KEGG	vsa:VSAL_I2584.
PATRIC	20855618. VBIAliSal95923_2809.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG404309.
OMA	DYWSISW.
ProtClustDB	CLSK874035.
Family and domain databases
InterPro	IPR008928. 6-hairpin_glycosidase-like. IPR012341. 6hp_glycosidase. IPR009342. Carb-bd_put_dom. IPR006775. Glucosylceramidase. IPR011013. Glyco_hydro-type_carb-bd. IPR010383. Glyco_transf_36. IPR010403. GT36_AF. [Graphical view]
Gene3D	G3DSA:1.50.10.10. CelA/Cel48F_cat. 1 hit.
Pfam	PF06204. CBM_X. 1 hit. PF04685. DUF608. 1 hit. PF06165. Glyco_transf_36. 1 hit. PF06205. GT36_AF. 1 hit. [Graphical view]
SMART	SM01068. CBM_X. 1 hit. [Graphical view]
SUPFAM	SSF74650. Gal_mut_like. 1 hit. SSF48208. Glyco_trans_6hp. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B6EL16_ALISL

Accession

Primary (citable) accession number: B6EL16

Entry history

Integrated into UniProtKB/TrEMBL:	November 25, 2008
Last sequence update:	November 25, 2008
Last modified:	January 25, 2012
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)