B6EJY1 (B6EJY1_ALISL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative exported amidase EMBL CAQ78928.1

Gene names

Ordered Locus Names:

VSAL_I1243

Organism

Aliivibrio salmonicida (strain LFI1238) (Vibrio salmonicida (strain LFI1238)) [Complete proteome] [HAMAP] EMBL CAQ78928.1

Taxonomic identifier

316275 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Aliivibrio

Protein attributes

Sequence length	302 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL CAQ78928.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	peptidoglycan catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	amidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 24	24	Potential EMBL CAQ78928.1
	Chain	25 – 302	278	Potential EMBL CAQ78928.1		PRO_5000405883

Sequences

	Sequence		Length	Mass (Da)
	B6EJY1 [UniParc]. Last modified November 25, 2008. Version 1. Checksum: 1EC569CF2BFB0636	FASTA	302	34,015
	10 20 30 40 50 60 MSLSKKLKHI SASLLLIASS SAIANTSLPL SPEKITQPYP EVEVETIHSA QSLISEFKEH 70 80 90 100 110 120 QYQLSNITKN STVPVFFVEN LPDDLNSLPV EEKISGFIRL LLPTIIDVNK HIITVRNEAI 130 140 150 160 170 180 SLSKQPKTEW TKEESLWMSN LMASYDVNTN NIDELLLHLD VIPVGMVLAQ GIDESGWGTS 190 200 210 220 230 240 YFAINGNSLF GEHLSSQGGK YLSTPGGHVK VAAFDNLFEG TARYMYNLNT TSAYHDLWTL 250 260 270 280 290 300 RQQLRKDNKL SGYELVESLS HYSTRGQAYV DNLQALIKHH HLDSFDNVEF NYTTPLRIRF TK

References

[1]

"The complete genome sequence of the fish pathogen Aliivibrio salmonicida strain LFI1238." Hjerde E., Lorentzen M.S., Holden M.T.G., Seeger K., Paulsen S., Bason N., Churcher C., Harris D., Norbertczak H., Quail M.A., Sanders S., Thurston S., Parkhill J., Willassen N.-P., Thomson N.R. Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	FM178379 Genomic DNA. Translation: CAQ78928.1.
RefSeq	YP_002262713.1. NC_011312.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B6EJY1.
Protein family/group databases
CAZy	GH73. Glycoside Hydrolase Family 73.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6986928.
GenomeReviews	Gene locus VSAL_I1243 in contig FM178379_GR.
KEGG	vsa:VSAL_I1243.
PATRIC	20852722. VBIAliSal95923_1385.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG303241.
OMA	WGTSYFA.
ProtClustDB	CLSK936981.
Family and domain databases
InterPro	IPR002901. Mano_Glyc_endo_b_GlcNAc. [Graphical view]
Pfam	PF01832. Glucosaminidase. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B6EJY1_ALISL

Accession

Primary (citable) accession number: B6EJY1

Entry history

Integrated into UniProtKB/TrEMBL:	November 25, 2008
Last sequence update:	November 25, 2008
Last modified:	December 14, 2011
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)