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B6EHQ6

- B6EHQ6_ALISL

UniProt

B6EHQ6 - B6EHQ6_ALISL

Protein
Submitted name:

Pyridoxal-dependent decarboxylase

Gene

VSAL_I2032

Organism
Aliivibrio salmonicida (strain LFI1238) (Vibrio salmonicida (strain LFI1238))
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 37 (01 Oct 2014)
      Sequence version 1 (25 Nov 2008)
      Previous versions | rss
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    Functioni

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. carboxy-lyase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. carboxylic acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotationImported

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Pyridoxal-dependent decarboxylaseImported (EC:4.1.1.-Imported)
    Gene namesi
    Ordered Locus Names:VSAL_I2032Imported
    OrganismiAliivibrio salmonicida (strain LFI1238) (Vibrio salmonicida (strain LFI1238))Imported
    Taxonomic identifieri316275 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio
    ProteomesiUP000001730: Chromosome 1

    Interactioni

    Protein-protein interaction databases

    STRINGi316275.VSAL_I2032.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0076.
    HOGENOMiHOG000282553.
    KOiK01580.
    OMAiGMMHNLV.
    OrthoDBiEOG6MSRZP.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B6EHQ6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVTDNKTADA NLESMLRIFT VPEAPDSTLG KIEQELSQNL NQFLREHIVA    50
    EEKPLTEIEK DFTDSSMPEY PTYVSEHTEH LLETVVSQSV HTSAPSFIGH 100
    MTSALPYFLM PLSKIMIALN QNLVKIETSK AFTPLERQVL GMLHRLIYGQ 150
    ESAFYERWMH SADHSLGAFC SGGTIANITA LWVARNRLLQ PEGNFKGIAQ 200
    EGLFAALTHY KYSGLAIFVS ERGHYSVKKA ADVLGIGQDS VIPVKTDNNN 250
    RICLHDLKLK MAQAKEKNIK PLAIIGVAGT TETGTIDPLR ALAEVAKQVN 300
    CHFHVDAAWG GATLMSNQYR YLLDGIDLAD SVTIDAHKQL YVPMGAGMVI 350
    FKDPELMSSI QHHAEYILRK GSKDLGRHTL EGSRSGMAML LYSCFNVISR 400
    PGYELLINQS IEKAKYFAEI IDQQDDFEVI TQPELCLLTY RYIPKNVTLA 450
    LTKANPEQTI EIYDHLDELT KFIQKTQRET GKSFVSRTRL TPEAYQNMPT 500
    IVFRVVLANP LTTKEILHSV LIEQREIAQK SEISLPQLTK LADSILK 547
    Length:547
    Mass (Da):61,325
    Last modified:November 25, 2008 - v1
    Checksum:i20C3C30F218E245F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FM178379 Genomic DNA. Translation: CAQ79717.1.
    RefSeqiWP_012550578.1. NC_011312.1.
    YP_002263411.1. NC_011312.1.

    Genome annotation databases

    EnsemblBacteriaiCAQ79717; CAQ79717; VSAL_I2032.
    GeneIDi6988652.
    KEGGivsa:VSAL_I2032.
    PATRICi20854424. VBIAliSal95923_2222.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FM178379 Genomic DNA. Translation: CAQ79717.1 .
    RefSeqi WP_012550578.1. NC_011312.1.
    YP_002263411.1. NC_011312.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 316275.VSAL_I2032.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAQ79717 ; CAQ79717 ; VSAL_I2032 .
    GeneIDi 6988652.
    KEGGi vsa:VSAL_I2032.
    PATRICi 20854424. VBIAliSal95923_2222.

    Phylogenomic databases

    eggNOGi COG0076.
    HOGENOMi HOG000282553.
    KOi K01580.
    OMAi GMMHNLV.
    OrthoDBi EOG6MSRZP.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The genome sequence of the fish pathogen Aliivibrio salmonicida strain LFI1238 shows extensive evidence of gene decay."
      Hjerde E., Lorentzen M.S., Holden M.T., Seeger K., Paulsen S., Bason N., Churcher C., Harris D., Norbertczak H., Quail M.A., Sanders S., Thurston S., Parkhill J., Willassen N.P., Thomson N.R.
      BMC Genomics 9:616-616(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: LFI1238Imported.

    Entry informationi

    Entry nameiB6EHQ6_ALISL
    AccessioniPrimary (citable) accession number: B6EHQ6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 25, 2008
    Last sequence update: November 25, 2008
    Last modified: October 1, 2014
    This is version 37 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3