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Protein
Submitted name:

Alpha-amylase

Gene

malS

Organism
Aliivibrio salmonicida (strain LFI1238) (Vibrio salmonicida (strain LFI1238))
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseImported, Hydrolase

Protein family/group databases

CAZyiGH13 Glycoside Hydrolase Family 13

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
Name:malSImported
Ordered Locus Names:VSAL_I2966Imported
OrganismiAliivibrio salmonicida (strain LFI1238) (Vibrio salmonicida (strain LFI1238))Imported
Taxonomic identifieri316275 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio
Proteomesi
  • UP000001730 Componenti: Chromosome 1

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 18Sequence analysisAdd BLAST18
ChainiPRO_500284434919 – 554Sequence analysisAdd BLAST536

Interactioni

Protein-protein interaction databases

STRINGi316275.VSAL_I2966

Structurei

3D structure databases

ProteinModelPortaliB6EGT4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini124 – 514AamyInterPro annotationAdd BLAST391

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiCOG0366 LUCA
HOGENOMiHOG000073462
KOiK01176
OMAiDKVMVVW
OrthoDBiPOG091H07J7

Family and domain databases

InterProiView protein in InterPro
IPR006047 Glyco_hydro_13_cat_dom
IPR017853 Glycoside_hydrolase_SF
PfamiView protein in Pfam
PF00128 Alpha-amylase, 1 hit
SMARTiView protein in SMART
SM00642 Aamy, 1 hit
SUPFAMiSSF51445 SSF51445, 2 hits

Sequencei

Sequence statusi: Complete.

B6EGT4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLSVCATFI SLSLLVGCQS TSLTSTDSSD SISTADSSNQ IESTTSSNNN
60 70 80 90 100
TAICPVLGIQ PVTVSVSDLW ANGDVITDAY TGNIAQVVNG EITLTPSRHS
110 120 130 140 150
GGVLLLESEE EKARFSWDGA TFYHIATDRF FNGNSWNDHS YGRQSTKEGF
160 170 180 190 200
QGGDIVGLTK KLDYLAELGV DVVWISTPLE QVHGWLPNKS GNSPEYPYAG
210 220 230 240 250
GATLDWTQLD TNMGSEQEMR TFVDLAHQLG MRVMWSVDTA PPTPTLSDLQ
260 270 280 290 300
QFSIQPNNPD ALPSYWSEWQ PQEGQNLTHY LDAFKNKNGE IPDWWSEAWM
310 320 330 340 350
EENNENAITL PAFFANKPST KVKSSEKTKN EYLAGWMSAW VSEFGIDGFV
360 370 380 390 400
VSNSTPELTQ KIEQEGKDAF TLWNKDNAYK ALENASFRVI DLQQQNYFSD
410 420 430 440 450
QMLSLKSNDE PHCLTKLNAE YVTQSQAEKP SMTRLTWFDG KSLSDSSVGS
460 470 480 490 500
VNADNYADYR DAATALLLSP NAVSIWYGDE TAKMGGIYSK MNWNEIKDQR
510 520 530 540 550
WSLQSHWKKL IEFRNNHSSI ANGEHQVIKR EPYYAFIRKN ESDSVMVVYT

GEKK
Length:554
Mass (Da):61,960
Last modified:November 25, 2008 - v1
Checksum:i09FE362C3109264D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FM178379 Genomic DNA Translation: CAQ80650.1
RefSeqiWP_012551368.1, NC_011312.1

Genome annotation databases

EnsemblBacteriaiCAQ80650; CAQ80650; VSAL_I2966
KEGGivsa:VSAL_I2966

Similar proteinsi

Entry informationi

Entry nameiB6EGT4_ALISL
AccessioniPrimary (citable) accession number: B6EGT4
Entry historyiIntegrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: April 25, 2018
This is version 58 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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