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B6EGP9 (B6EGP9_ALISL) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Putative signaling protein EMBL CAQ80614.1
Gene names
Ordered Locus Names:VSAL_I2930
OrganismAliivibrio salmonicida (strain LFI1238) (Vibrio salmonicida (strain LFI1238)) [Complete proteome] [HAMAP] EMBL CAQ80614.1
Taxonomic identifier316275 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Aliivibrio

Protein attributes

Sequence length406 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
B6EGP9 [UniParc].

Last modified November 25, 2008. Version 1.
Checksum: 976A313CE769BBE7

FASTA40646,726
        10         20         30         40         50         60 
MYAYVARQPI LNRKKQTIGY ELLFRDGESN AFPDDIEANQ ATCRLLVENF MSVGCNPALE 

        70         80         90        100        110        120 
SPRSFINFPQ ESLISLIPTS FPKRKIVVEV LETCIPNDEL FSAIKHLHRM GYIIALDDFS 

       130        140        150        160        170        180 
LDAVWDRFLP YAHIVKLDIM QLGINVACDY VKKKKREGCK RHYLAERVET NEEFQQAFDA 

       190        200        210        220        230        240 
GFYFYQGYFF SKPEIIKNRV VKPEEVLTMQ LFQEVCRDDV NFNRIEQLIA QDVSLSYQLL 

       250        260        270        280        290        300 
KFVNTSAVRL EKPISSFKQA LVYLGEEQIK MFVTLVATAH AAINKPKELY KQSLIKGRFC 

       310        320        330        340        350        360 
ELMICKCQNG TQGQQAFIVG LFSLLDALLD RNFDELLVQL SLSEDIEQAL LTQSGLLGSM 

       370        380        390        400 
LKLYENVDKG DWTHIDQVSR SLGFSAKTVE KTYEEAEKWY QDILSK

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References

[1]"The complete genome sequence of the fish pathogen Aliivibrio salmonicida strain LFI1238."
Hjerde E., Lorentzen M.S., Holden M.T.G., Seeger K., Paulsen S., Bason N., Churcher C., Harris D., Norbertczak H., Quail M.A., Sanders S., Thurston S., Parkhill J., Willassen N.-P., Thomson N.R.
Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		FM178379 Genomic DNA. Translation: CAQ80614.1.
RefSeqYP_002264259.1. NC_011312.1.

3D structure databases

ProteinModelPortalB6EGP9.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6987974.
GenomeReviewsGene locus VSAL_I2930 in contig FM178379_GR.
KEGGvsa:VSAL_I2930.
PATRIC20856400. VBIAliSal95923_3171.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG537479.
OMARQPIFNR.
ProtClustDBCLSK712239.

Family and domain databases

InterProIPR014408. dGMP_Pdiesterase_EAL/HD-GYP.
IPR001633. Diguanylate_PEstase_EAL_dom.
IPR013976. HDOD.
[Graphical view]
Gene3DG3DSA:3.20.20.450. G3DSA:3.20.20.450. 1 hit.
G3DSA:1.10.3150.10. HDOD. 1 hit.
KOK07181.
PfamPF00563. EAL. 1 hit.
PF08668. HDOD. 1 hit.
[Graphical view]
PIRSFPIRSF003180. DiGMPpdiest_YuxH. 1 hit.
SMARTSM00052. EAL. 1 hit.
[Graphical view]
SUPFAMSSF141868. SSF141868. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB6EGP9_ALISL
AccessionPrimary (citable) accession number: B6EGP9
Entry history
Integrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: December 14, 2011
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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