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B6CZ62

- TOMT_RAT

UniProt

B6CZ62 - TOMT_RAT

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Protein

Transmembrane O-methyltransferase

Gene
Tomt, Comt2
Organism
Rattus norvegicus (Rat)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at transcript leveli

Functioni

Catalyzes the O-methylation, and thereby the inactivation, of catecholamine neurotransmitters and catechol hormones. Required for auditory function By similarity.By similarity

Catalytic activityi

S-adenosyl-L-methionine + a catechol = S-adenosyl-L-homocysteine + a guaiacol.By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei104 – 1041S-adenosyl-L-methionine By similarity
Binding sitei112 – 1121S-adenosyl-L-methionine By similarity
Binding sitei130 – 1301S-adenosyl-L-methionine By similarity
Binding sitei160 – 1601S-adenosyl-L-methionine; via amide nitrogen By similarity

GO - Molecular functioni

  1. catechol O-methyltransferase activity Source: UniProtKB-EC

GO - Biological processi

  1. auditory receptor cell development Source: Ensembl
  2. catecholamine catabolic process Source: Ensembl
  3. neurotransmitter catabolic process Source: UniProtKB-KW
  4. sensory perception of sound Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Methyltransferase, Transferase

Keywords - Biological processi

Catecholamine metabolism, Hearing, Neurotransmitter degradation

Keywords - Ligandi

S-adenosyl-L-methionine

Names & Taxonomyi

Protein namesi
Recommended name:
Transmembrane O-methyltransferase (EC:2.1.1.6)
Alternative name(s):
Catechol O-methyltransferase 2
Protein LRTOMT2
Gene namesi
Name:Tomt
Synonyms:Comt2
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 1

Organism-specific databases

RGDi1561509. Tomt.

Subcellular locationi

Cytoplasm By similarity By similarity

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 258258Transmembrane O-methyltransferasePRO_0000372489Add
BLAST

Proteomic databases

PaxDbiB6CZ62.

Expressioni

Gene expression databases

GenevestigatoriB6CZ62.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000036144.

Structurei

3D structure databases

ProteinModelPortaliB6CZ62.

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni106 – 1072S-adenosyl-L-methionine binding By similarity

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG4122.
GeneTreeiENSGT00390000011316.
HOGENOMiHOG000046392.
OMAiIPCLRTQ.
OrthoDBiEOG77T154.
PhylomeDBiB6CZ62.
TreeFamiTF329140.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
InterProiIPR025782. Catechol_O-MeTrfase.
IPR002935. O-MeTrfase_3.
IPR029063. SAM-dependent_MTases-like.
[Graphical view]
PANTHERiPTHR10509. PTHR10509. 1 hit.
PfamiPF01596. Methyltransf_3. 1 hit.
[Graphical view]
SUPFAMiSSF53335. SSF53335. 1 hit.
PROSITEiPS51682. SAM_OMT_I. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B6CZ62-1 [UniParc]FASTAAdd to Basket

« Hide

MSPAIALAFL PLVVTLLVRY RHHFRLLVRT VLLRSFRDCL SGLRIEERAF    50
SYVITHALPG DPGHILTTLD HWSSCCEYLS HMGPIKGQIL MRLVEEKAPA 100
CVLELGTHCG YSTLLIARAL PPGSRLLTVE RDSRTAAVAE KVIRLAGFDE 150
QMVELIAGSS EEVIPRLRAQ HQLNRADLVL LAHRPRYYLR DLQLLEAHAL 200
LPHGATVLAD HVLFPGAPRF LQYTKSCGRY RCRLHHTSLP DFPAIKDGIA 250
QLTYTGPG 258
Length:258
Mass (Da):28,864
Last modified:November 25, 2008 - v1
Checksum:iAF1EFE98697A0B42
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
EU627093 mRNA. Translation: ACF40903.1.
RefSeqiNP_001132966.1. NM_001139494.1.
UniGeneiRn.220283.

Genome annotation databases

EnsembliENSRNOT00000039564; ENSRNOP00000036144; ENSRNOG00000023434.
GeneIDi308868.
KEGGirno:308868.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
EU627093 mRNA. Translation: ACF40903.1 .
RefSeqi NP_001132966.1. NM_001139494.1.
UniGenei Rn.220283.

3D structure databases

ProteinModelPortali B6CZ62.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 10116.ENSRNOP00000036144.

Proteomic databases

PaxDbi B6CZ62.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000039564 ; ENSRNOP00000036144 ; ENSRNOG00000023434 .
GeneIDi 308868.
KEGGi rno:308868.

Organism-specific databases

CTDi 791260.
RGDi 1561509. Tomt.

Phylogenomic databases

eggNOGi COG4122.
GeneTreei ENSGT00390000011316.
HOGENOMi HOG000046392.
OMAi IPCLRTQ.
OrthoDBi EOG77T154.
PhylomeDBi B6CZ62.
TreeFami TF329140.

Miscellaneous databases

NextBioi 659690.

Gene expression databases

Genevestigatori B6CZ62.

Family and domain databases

Gene3Di 3.40.50.150. 1 hit.
InterProi IPR025782. Catechol_O-MeTrfase.
IPR002935. O-MeTrfase_3.
IPR029063. SAM-dependent_MTases-like.
[Graphical view ]
PANTHERi PTHR10509. PTHR10509. 1 hit.
Pfami PF01596. Methyltransf_3. 1 hit.
[Graphical view ]
SUPFAMi SSF53335. SSF53335. 1 hit.
PROSITEi PS51682. SAM_OMT_I. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: Sprague-Dawley.
    Tissue: Brain.

Entry informationi

Entry nameiTOMT_RAT
AccessioniPrimary (citable) accession number: B6CZ62
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 5, 2009
Last sequence update: November 25, 2008
Last modified: June 11, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Miscellaneous

In primates, this protein is produced by a bicistronic gene which also produces the LRRC51 protein from an overlapping reading frame. In rodents, these proteins are produced by 2 separate adjacent genes which together are orthologous to the single primate gene.1 Publication

Caution

Despite its name, the rat TOMT protein does not contain a transmembrane region in contrast to primate orthologs.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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