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Protein
Submitted name:

DNA polymerase LigD, ligase domain protein

Gene

Rleg2_5730

Organism
Rhizobium leguminosarum bv. trifolii (strain WSM2304)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD, ligase domain proteinImported
Gene namesi
Ordered Locus Names:Rleg2_5730Imported
Encoded oniPlasmid pRLG202Imported
OrganismiRhizobium leguminosarum bv. trifolii (strain WSM2304)Imported
Taxonomic identifieri395492 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
Proteomesi
  • UP000008330 Componenti: Plasmid pRLG202

Structurei

3D structure databases

ProteinModelPortaliB6A3C2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini138 – 229DNA_LIGASE_A3InterPro annotationAdd BLAST92

Phylogenomic databases

HOGENOMiHOG000222509
KOiK01971
OMAiSFMIVGY

Family and domain databases

InterProiView protein in InterPro
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR014146 LigD_ligase_dom
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR02779 NHEJ_ligase_lig, 1 hit
PROSITEiView protein in PROSITE
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

B6A3C2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTRSRRPSLP FLNESNATLQ SRPIRKRDPD QPSLPFDPMP ARVEPCLALL
60 70 80 90 100
KPKVPIGPDW LYEAKWDGYR LAIHIEPKGV RVITRGGHDW THRFPTIAAA
110 120 130 140 150
AKELGVTTGI LDGEAVVLDD HGRSDFGALQ RSLGGRGGKR ASSESILYAF
160 170 180 190 200
DLLYLDGHDL TGTELAVRRH LLKDLIPEDN RTIRFSEEID LPAEDLLEHA
210 220 230 240 250
CHHHMEGIIA KHRDRPYSSG RTGDWLKIKC VESESFMIVG YEQSAAARGG
260 270 280 290 300
IGSLLLAGKR GFDWISVGSV GTGFSASDAA QLKKTLDRLK TNRPVVPLKG
310 320 330 340 350
KRYVFVQPTL IAEIEFRGWT DDGSLRHASY KGLREVQDNA AVFDMTGFDR
Length:350
Mass (Da):38,929
Last modified:November 25, 2008 - v1
Checksum:iB0DD8B99374F8211
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001193 Genomic DNA Translation: ACI58905.1
RefSeqiWP_012555106.1, NC_011366.1

Genome annotation databases

EnsemblBacteriaiACI58905; ACI58905; Rleg2_5730
GeneIDi34189522
KEGGirlt:Rleg2_5730

Similar proteinsi

Entry informationi

Entry nameiB6A3C2_RHILW
AccessioniPrimary (citable) accession number: B6A3C2
Entry historyiIntegrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: May 23, 2018
This is version 54 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported, PlasmidImported

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