Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

B6A3C2 (B6A3C2_RHILW) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:Rleg2_5730 EMBL ACI58905.1
Encoded onPlasmid pRLG202 EMBL ACI58905.1
OrganismRhizobium leguminosarum bv. trifolii (strain WSM2304) [Complete proteome] [HAMAP] EMBL ACI58905.1
Taxonomic identifier395492 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium

Protein attributes

Sequence length350 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ACI58905.1
   Technical termComplete proteome
Plasmid EMBL ACI58905.1
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B6A3C2 [UniParc].

Last modified November 25, 2008. Version 1.
Checksum: B0DD8B99374F8211

FASTA35038,929
        10         20         30         40         50         60 
MTRSRRPSLP FLNESNATLQ SRPIRKRDPD QPSLPFDPMP ARVEPCLALL KPKVPIGPDW 

        70         80         90        100        110        120 
LYEAKWDGYR LAIHIEPKGV RVITRGGHDW THRFPTIAAA AKELGVTTGI LDGEAVVLDD 

       130        140        150        160        170        180 
HGRSDFGALQ RSLGGRGGKR ASSESILYAF DLLYLDGHDL TGTELAVRRH LLKDLIPEDN 

       190        200        210        220        230        240 
RTIRFSEEID LPAEDLLEHA CHHHMEGIIA KHRDRPYSSG RTGDWLKIKC VESESFMIVG 

       250        260        270        280        290        300 
YEQSAAARGG IGSLLLAGKR GFDWISVGSV GTGFSASDAA QLKKTLDRLK TNRPVVPLKG 

       310        320        330        340        350 
KRYVFVQPTL IAEIEFRGWT DDGSLRHASY KGLREVQDNA AVFDMTGFDR 

« Hide

References

[1]"Complete sequence of plasmid 2 of Rhizobium leguminosarum bv. trifolii WSM2304."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Yates R. expand/collapse author list , Ardley J., Tiwari R.P., O'Hara G., Howieson J., Brau L., Reeve W.
Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: WSM2304.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001193 Genomic DNA. Translation: ACI58905.1.
RefSeqYP_002278005.1. NC_011366.1.

3D structure databases

ProteinModelPortalB6A3C2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING395492.Rleg2_5730.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACI58905; ACI58905; Rleg2_5730.
GeneID6977121.
KEGGrlt:Rleg2_5730.
PATRIC23120538. VBIRhiLeg95088_0121.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000222509.
KOK01971.
OMALEHACHH.
OrthoDBEOG661H49.

Enzyme and pathway databases

BioCycRLEG395492:GJB3-5797-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB6A3C2_RHILW
AccessionPrimary (citable) accession number: B6A3C2
Entry history
Integrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: May 14, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)