B5ZXH9 (B5ZXH9_RHILW) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Deoxyribose-phosphate aldolase EMBL ACI57438.1
EC=4.1.2.4 EMBL ACI57438.1

Gene names

Ordered Locus Names:

Rleg2_4176

Organism

Rhizobium leguminosarum bv. trifolii (strain WSM2304) [Complete proteome] [HAMAP]

Taxonomic identifier

395492 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium

Protein attributes

Sequence length	258 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate By similarity. SAAS SAAS011343
Catalytic activity	2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde. SAAS SAAS011343
Pathway	Carbohydrate degradation; 2-deoxy-D-ribose 1-phosphate degradation; D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-alpha-D-ribose 1-phosphate: step 2/2. SAAS SAAS011343

Ontologies

Keywords
Ligand	Schiff base SAAS SAAS011343
Molecular function	Lyase SAAS SAAS011343 EMBL ACI57438.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	deoxyribonucleotide catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	deoxyribose-phosphate aldolase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B5ZXH9 [UniParc]. Last modified November 25, 2008. Version 1. Checksum: A0DF803239340BD3	FASTA	258	27,026
	10 20 30 40 50 60 MNSHSNRETA AVALSLLDLT NLKDDCTEAQ IEALCTRAQT PYGNSAAICI WPRFVAYARN 70 80 90 100 110 120 ILGTGHAVRI ATVVNFPSGD MEVADVAAET REAIADGADE IDLVIPYRKL ISGNEKAVTD 130 140 150 160 170 180 MVKAIRAECA GPVLLKVIIE AGELKDAALI RRASELAIEA GADFIKTSTG KVAVNATLEA 190 200 210 220 230 240 ADIMIRAIRE SGRKVGFKPA GGIGSVADAA LYLSLAETIM APDWAMPSTF RFGASGLLDD 250 ILAVLSGTQS APAAASSY

References

[1]

"Complete sequence of chromosome of Rhizobium leguminosarum bv. trifolii WSM2304." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Yates R. , Ardley J., Tiwari R.P., O'Hara G., Howieson J., Brau L., Reeve W. Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: WSM2304.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001191 Genomic DNA. Translation: ACI57438.1.
RefSeq	YP_002283664.1. NC_011369.1.
3D structure databases
ProteinModelPortal	B5ZXH9.
SMR	B5ZXH9. Positions 8-246.
ModBase	Search...
Protein-protein interaction databases
STRING	B5ZXH9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6982949.
GenomeReviews	Gene locus Rleg2_4176 in contig CP001191_GR.
KEGG	rlt:Rleg2_4176.
PATRIC	23132672. VBIRhiLeg95088_6127.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG636421.
OMA	FELVKQC.
ProtClustDB	PRK05283.
Family and domain databases
InterPro	IPR013785. Aldolase_TIM. IPR011343. DeoC. IPR002915. DeoC/AroFGH_arch. [Graphical view]
Gene3D	G3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KO	K01619.
PANTHER	PTHR10889. DeoC. 1 hit.
Pfam	PF01791. DeoC. 1 hit. [Graphical view]
PIRSF	PIRSF001357. DeoC. 1 hit.
TIGRFAMs	TIGR00126. DeoC. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B5ZXH9_RHILW

Accession

Primary (citable) accession number: B5ZXH9

Entry history

Integrated into UniProtKB/TrEMBL:	November 25, 2008
Last sequence update:	November 25, 2008
Last modified:	December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)