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B5ZW64 (B5ZW64_RHILW) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Dihydrodipicolinate synthase EMBL ACI54283.1
Gene names
Ordered Locus Names:Rleg2_0989
OrganismRhizobium leguminosarum bv. trifolii (strain WSM2304) [Complete proteome] [HAMAP]
Taxonomic identifier395492 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium

Protein attributes

Sequence length294 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-aspartate 4-semialdehyde + pyruvate = dihydrodipicolinate + 2 H2O. SAAS SAAS005263

Pathway

Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; (S)-tetrahydrodipicolinate from L-aspartate: step 3/4. SAAS SAAS005263

Subcellular location

Cytoplasm By similarity SAAS SAAS005263.

Ontologies

Keywords
   Biological processAmino-acid biosynthesis
Diaminopimelate biosynthesis SAAS SAAS005263
Lysine biosynthesis SAAS SAAS005263
   Cellular componentCytoplasm SAAS SAAS005263
   LigandSchiff base SAAS SAAS005263
   Molecular functionLyase SAAS SAAS005263
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processdiaminopimelate biosynthetic process

Inferred from electronic annotation. Source: HAMAP

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functiondihydrodipicolinate synthase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B5ZW64 [UniParc].

Last modified November 25, 2008. Version 1.
Checksum: 0C2EA1251750520B

FASTA29430,989
        10         20         30         40         50         60 
MFTGSIPALV TPFSDAGLID EDSFAAHVDW QIKEGSSGLV PVGTTGESPT LSHAEHKRVV 

        70         80         90        100        110        120 
ELCIEVAAKR VPVMAGAGSN NTGEAIELAQ HAEKVGADAV LVVTPYYNKP TQKGLIAHFS 

       130        140        150        160        170        180 
AIARAVDLPI YIYNIPGRSV VDMTPETMGA LAKAHGNIVG VKDATGKIER VSEQRITCGK 

       190        200        210        220        230        240 
DFRQLSGEDA TALGFNAHGG VGCISVTANV APRLCADFQA ATLKGDYASA LEYQDRLMPL 

       250        260        270        280        290 
HKAIFLEPGL CGAKYGLSRL GRMSRNVRSP LLSTLEPSTE AAIDAALRHA GLLN

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References

[1]"Complete sequence of chromosome of Rhizobium leguminosarum bv. trifolii WSM2304."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Yates R. expand/collapse author list , Ardley J., Tiwari R.P., O'Hara G., Howieson J., Brau L., Reeve W.
Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: WSM2304.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001191 Genomic DNA. Translation: ACI54283.1.
RefSeqYP_002280509.1. NC_011369.1.

3D structure databases

ProteinModelPortalB5ZW64.
SMRB5ZW64. Positions 1-290.
ModBaseSearch...

Protein-protein interaction databases

STRINGB5ZW64.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6979708.
GenomeReviewsGene locus Rleg2_0989 in contig CP001191_GR.
KEGGrlt:Rleg2_0989.
PATRIC23125900. VBIRhiLeg95088_2792.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG358848.
OMANITATPY.
ProtClustDBPRK03170.

Family and domain databases

InterProIPR013785. Aldolase_TIM.
IPR002220. Dihydrodipicolinate_synth-like.
IPR020625. Dihydrodipicolinate_synth_AS.
IPR020624. Dihydrodipicolinate_synth_CS.
IPR005263. Dihydrodipicolinate_synth_DapA.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01714.
PANTHERPTHR12128. DHDPS. 1 hit.
PfamPF00701. DHDPS. 1 hit.
[Graphical view]
PIRSFPIRSF001365. DHDPS. 1 hit.
PRINTSPR00146. DHPICSNTHASE.
TIGRFAMsTIGR00674. DapA. 1 hit.
PROSITEPS00665. DHDPS_1. 1 hit.
PS00666. DHDPS_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB5ZW64_RHILW
AccessionPrimary (citable) accession number: B5ZW64
Entry history
Integrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: December 14, 2011
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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