B5ZUW9 (B5ZUW9_RHILW) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Lysozyme RuleBase RU003788
EC=3.2.1.17 RuleBase RU003788

Gene names

Ordered Locus Names:

Rleg2_2404

Organism

Rhizobium leguminosarum bv. trifolii (strain WSM2304) [Complete proteome] [HAMAP]

Taxonomic identifier

395492 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium

Protein attributes

Sequence length	154 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Hydrolysis of (1->4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins. RuleBase RU003788
Sequence similarities	Belongs to the glycosyl hydrolase 24 family. RuleBase RU003788

Ontologies

Keywords
Domain	Signal EMBL ACI55678.1
Molecular function	Antimicrobial Bacteriolytic enzyme RuleBase RU003788 Glycosidase RuleBase RU003788 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro cytolysis Inferred from electronic annotation. Source: UniProtKB-KW defense response to bacterium Inferred from electronic annotation. Source: UniProtKB-KW peptidoglycan catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	lysozyme activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 30	30	Potential EMBL ACI55678.1
	Chain	31 – 154	124	Potential EMBL ACI55678.1		PRO_5000404073

Sequences

	Sequence		Length	Mass (Da)
	B5ZUW9 [UniParc]. Last modified November 25, 2008. Version 1. Checksum: 64DFE3AD9435BC1C	FASTA	154	16,403
	10 20 30 40 50 60 MANRLQKGSA AAAMAVALVG SFEGLRQSAY PDPATQGQPW TICYGSTNGV KPGDRKTVEQ 70 80 90 100 110 120 CKALLALELQ TYAAGIDHCV AVPLPDARFV ALTSFAYNVG VKAACGSSAV KLINKGKTAE 130 140 150 GCEALLKWNR AAGIVFPGLT RRRQKERQFC LEDL

References

[1]

"Complete sequence of chromosome of Rhizobium leguminosarum bv. trifolii WSM2304." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Yates R. , Ardley J., Tiwari R.P., O'Hara G., Howieson J., Brau L., Reeve W. Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: WSM2304.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001191 Genomic DNA. Translation: ACI55678.1.
RefSeq	YP_002281904.1. NC_011369.1.
3D structure databases
ProteinModelPortal	B5ZUW9.
ModBase	Search...
Protein-protein interaction databases
STRING	B5ZUW9.
Protein family/group databases
CAZy	GH24. Glycoside Hydrolase Family 24.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6981144.
GenomeReviews	Gene locus Rleg2_2404 in contig CP001191_GR.
KEGG	rlt:Rleg2_2404.
PATRIC	23128922. VBIRhiLeg95088_4282.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG756417.
OMA	CEALLKW.
ProtClustDB	CLSK771129.
Family and domain databases
InterPro	IPR002196. Glyco_hydro_24. IPR023346. Lysozyme-like_dom. IPR023347. Lysozyme_dom. [Graphical view]
Gene3D	G3DSA:1.10.530.40. G3DSA:1.10.530.40. 1 hit.
KO	K01185.
Pfam	PF00959. Phage_lysozyme. 1 hit. [Graphical view]
SUPFAM	SSF53955. SSF53955. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B5ZUW9_RHILW

Accession

Primary (citable) accession number: B5ZUW9

Entry history

Integrated into UniProtKB/TrEMBL:	November 25, 2008
Last sequence update:	November 25, 2008
Last modified:	December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)