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B5ZQR5

- B5ZQR5_RHILW

UniProt

B5ZQR5 - B5ZQR5_RHILW

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Protein
Submitted name:

Alpha amylase catalytic region

Gene

Rleg2_1908

Organism
Rhizobium leguminosarum bv. trifolii (strain WSM2304)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciRLEG395492:GJB3-1939-MONOMER.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic regionImported
Gene namesi
Ordered Locus Names:Rleg2_1908Imported
OrganismiRhizobium leguminosarum bv. trifolii (strain WSM2304)Imported
Taxonomic identifieri395492 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
ProteomesiUP000008330: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi395492.Rleg2_1908.

Structurei

3D structure databases

ProteinModelPortaliB5ZQR5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000220639.
KOiK05343.
OMAiQWSTEPH.
OrthoDBiEOG6RVFV2.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

B5ZQR5-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MINDLWYKNA VIYCLSVETF MDANGDGVGD FQGLMRRLDY LSGLGVTAIW
60 70 80 90 100
LMPFQTSPGR DDGYDVSDYY NVDPRYGSLG DFVEFTHGAK QRGIRVLIDL
110 120 130 140 150
VINHTSKDHP WFQGARSDPH SPYRDWYVWS EKKPANADQG MVFPGVQKTT
160 170 180 190 200
WTHDEKARAY YFHRFYDHQP DLNTSNPEVQ AEILKIMGFW IQLGVSGFRM
210 220 230 240 250
DAAPFIIATK GADVSKPVEQ FDMLRKFREF LQWRLGDSII LAEANILPKD
260 270 280 290 300
NFEYFGNDGD RMQMMFNFQV NQALFYALAS ADTRPLKKAM ETTKPRPATA
310 320 330 340 350
QWGLFLRNHD ELDLGRLSEK QRGAVFAAFG PEKDMQLYDR GIRRRLAPML
360 370 380 390 400
GGDRRRIEMA YSLLFSLPGT PVIRYGDEIG MGDDLTLPER NCARTPMQWS
410 420 430 440 450
TEPEGGFTKS RKPVSPVIKD GPYGFQHVNV AEQRRDPNSL LNWTERMIRM
460 470 480 490 500
RKEAPEIGWG DFAVVDTGDD GVLALRYDWR GNSVLILHNL HGQPSEVTFD
510 520 530 540 550
PDVGEDGRQL IDIADGASSE ADEKGFHTVR LDAYGYRWYR VGGLDYLLRR

REI
Length:553
Mass (Da):63,315
Last modified:November 25, 2008 - v1
Checksum:i939A399A3DC2D743
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001191 Genomic DNA. Translation: ACI55193.1.
RefSeqiWP_012557789.1. NC_011369.1.
YP_002281419.1. NC_011369.1.

Genome annotation databases

EnsemblBacteriaiACI55193; ACI55193; Rleg2_1908.
GeneIDi6980647.
KEGGirlt:Rleg2_1908.
PATRICi23127858. VBIRhiLeg95088_3751.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001191 Genomic DNA. Translation: ACI55193.1 .
RefSeqi WP_012557789.1. NC_011369.1.
YP_002281419.1. NC_011369.1.

3D structure databases

ProteinModelPortali B5ZQR5.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 395492.Rleg2_1908.

Protein family/group databases

CAZyi GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACI55193 ; ACI55193 ; Rleg2_1908 .
GeneIDi 6980647.
KEGGi rlt:Rleg2_1908.
PATRICi 23127858. VBIRhiLeg95088_3751.

Phylogenomic databases

eggNOGi COG0366.
HOGENOMi HOG000220639.
KOi K05343.
OMAi QWSTEPH.
OrthoDBi EOG6RVFV2.

Enzyme and pathway databases

BioCyci RLEG395492:GJB3-1939-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProi IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 2 hits.
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome of Rhizobium leguminosarum bv. trifolii WSM2304."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Yates R.
    , Ardley J., Tiwari R.P., O'Hara G., Howieson J., Brau L., Reeve W.
    Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: WSM2304Imported.

Entry informationi

Entry nameiB5ZQR5_RHILW
AccessioniPrimary (citable) accession number: B5ZQR5
Entry historyi
Integrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: October 1, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3