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B5ZQR5

- B5ZQR5_RHILW

UniProt

B5ZQR5 - B5ZQR5_RHILW

Protein
Submitted name:

Alpha amylase catalytic region

Gene

Rleg2_1908

Organism
Rhizobium leguminosarum bv. trifolii (strain WSM2304)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 38 (01 Oct 2014)
      Sequence version 1 (25 Nov 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. catalytic activity Source: InterPro
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciRLEG395492:GJB3-1939-MONOMER.

    Protein family/group databases

    CAZyiGH13. Glycoside Hydrolase Family 13.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha amylase catalytic regionImported
    Gene namesi
    Ordered Locus Names:Rleg2_1908Imported
    OrganismiRhizobium leguminosarum bv. trifolii (strain WSM2304)Imported
    Taxonomic identifieri395492 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
    ProteomesiUP000008330: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi395492.Rleg2_1908.

    Structurei

    3D structure databases

    ProteinModelPortaliB5ZQR5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000220639.
    KOiK05343.
    OMAiQWSTEPH.
    OrthoDBiEOG6RVFV2.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 2 hits.
    InterProiIPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    B5ZQR5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MINDLWYKNA VIYCLSVETF MDANGDGVGD FQGLMRRLDY LSGLGVTAIW    50
    LMPFQTSPGR DDGYDVSDYY NVDPRYGSLG DFVEFTHGAK QRGIRVLIDL 100
    VINHTSKDHP WFQGARSDPH SPYRDWYVWS EKKPANADQG MVFPGVQKTT 150
    WTHDEKARAY YFHRFYDHQP DLNTSNPEVQ AEILKIMGFW IQLGVSGFRM 200
    DAAPFIIATK GADVSKPVEQ FDMLRKFREF LQWRLGDSII LAEANILPKD 250
    NFEYFGNDGD RMQMMFNFQV NQALFYALAS ADTRPLKKAM ETTKPRPATA 300
    QWGLFLRNHD ELDLGRLSEK QRGAVFAAFG PEKDMQLYDR GIRRRLAPML 350
    GGDRRRIEMA YSLLFSLPGT PVIRYGDEIG MGDDLTLPER NCARTPMQWS 400
    TEPEGGFTKS RKPVSPVIKD GPYGFQHVNV AEQRRDPNSL LNWTERMIRM 450
    RKEAPEIGWG DFAVVDTGDD GVLALRYDWR GNSVLILHNL HGQPSEVTFD 500
    PDVGEDGRQL IDIADGASSE ADEKGFHTVR LDAYGYRWYR VGGLDYLLRR 550
    REI 553
    Length:553
    Mass (Da):63,315
    Last modified:November 25, 2008 - v1
    Checksum:i939A399A3DC2D743
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001191 Genomic DNA. Translation: ACI55193.1.
    RefSeqiWP_012557789.1. NC_011369.1.
    YP_002281419.1. NC_011369.1.

    Genome annotation databases

    EnsemblBacteriaiACI55193; ACI55193; Rleg2_1908.
    GeneIDi6980647.
    KEGGirlt:Rleg2_1908.
    PATRICi23127858. VBIRhiLeg95088_3751.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001191 Genomic DNA. Translation: ACI55193.1 .
    RefSeqi WP_012557789.1. NC_011369.1.
    YP_002281419.1. NC_011369.1.

    3D structure databases

    ProteinModelPortali B5ZQR5.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 395492.Rleg2_1908.

    Protein family/group databases

    CAZyi GH13. Glycoside Hydrolase Family 13.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACI55193 ; ACI55193 ; Rleg2_1908 .
    GeneIDi 6980647.
    KEGGi rlt:Rleg2_1908.
    PATRICi 23127858. VBIRhiLeg95088_3751.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000220639.
    KOi K05343.
    OMAi QWSTEPH.
    OrthoDBi EOG6RVFV2.

    Enzyme and pathway databases

    BioCyci RLEG395492:GJB3-1939-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 2 hits.
    InterProi IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome of Rhizobium leguminosarum bv. trifolii WSM2304."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Yates R.
      , Ardley J., Tiwari R.P., O'Hara G., Howieson J., Brau L., Reeve W.
      Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: WSM2304Imported.

    Entry informationi

    Entry nameiB5ZQR5_RHILW
    AccessioniPrimary (citable) accession number: B5ZQR5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 25, 2008
    Last sequence update: November 25, 2008
    Last modified: October 1, 2014
    This is version 38 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3