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Protein

Alpha-amylase

Gene

Rleg2_1908

Organism
Rhizobium leguminosarum bv. trifolii (strain WSM2304)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciRLEG395492:GJB3-1921-MONOMER.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Rleg2_1908Imported
OrganismiRhizobium leguminosarum bv. trifolii (strain WSM2304)Imported
Taxonomic identifieri395492 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
Proteomesi
  • UP000008330 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi395492.Rleg2_1908.

Structurei

3D structure databases

ProteinModelPortaliB5ZQR5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini14 – 415AamyInterPro annotationAdd BLAST402

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CG3. Bacteria.
COG0366. LUCA.
HOGENOMiHOG000220639.
KOiK05343.
OMAiLLNWTER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 2 hits.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

B5ZQR5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MINDLWYKNA VIYCLSVETF MDANGDGVGD FQGLMRRLDY LSGLGVTAIW
60 70 80 90 100
LMPFQTSPGR DDGYDVSDYY NVDPRYGSLG DFVEFTHGAK QRGIRVLIDL
110 120 130 140 150
VINHTSKDHP WFQGARSDPH SPYRDWYVWS EKKPANADQG MVFPGVQKTT
160 170 180 190 200
WTHDEKARAY YFHRFYDHQP DLNTSNPEVQ AEILKIMGFW IQLGVSGFRM
210 220 230 240 250
DAAPFIIATK GADVSKPVEQ FDMLRKFREF LQWRLGDSII LAEANILPKD
260 270 280 290 300
NFEYFGNDGD RMQMMFNFQV NQALFYALAS ADTRPLKKAM ETTKPRPATA
310 320 330 340 350
QWGLFLRNHD ELDLGRLSEK QRGAVFAAFG PEKDMQLYDR GIRRRLAPML
360 370 380 390 400
GGDRRRIEMA YSLLFSLPGT PVIRYGDEIG MGDDLTLPER NCARTPMQWS
410 420 430 440 450
TEPEGGFTKS RKPVSPVIKD GPYGFQHVNV AEQRRDPNSL LNWTERMIRM
460 470 480 490 500
RKEAPEIGWG DFAVVDTGDD GVLALRYDWR GNSVLILHNL HGQPSEVTFD
510 520 530 540 550
PDVGEDGRQL IDIADGASSE ADEKGFHTVR LDAYGYRWYR VGGLDYLLRR

REI
Length:553
Mass (Da):63,315
Last modified:November 25, 2008 - v1
Checksum:i939A399A3DC2D743
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001191 Genomic DNA. Translation: ACI55193.1.
RefSeqiWP_012557789.1. NC_011369.1.

Genome annotation databases

EnsemblBacteriaiACI55193; ACI55193; Rleg2_1908.
KEGGirlt:Rleg2_1908.
PATRICi23127858. VBIRhiLeg95088_3751.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001191 Genomic DNA. Translation: ACI55193.1.
RefSeqiWP_012557789.1. NC_011369.1.

3D structure databases

ProteinModelPortaliB5ZQR5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi395492.Rleg2_1908.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACI55193; ACI55193; Rleg2_1908.
KEGGirlt:Rleg2_1908.
PATRICi23127858. VBIRhiLeg95088_3751.

Phylogenomic databases

eggNOGiENOG4105CG3. Bacteria.
COG0366. LUCA.
HOGENOMiHOG000220639.
KOiK05343.
OMAiLLNWTER.

Enzyme and pathway databases

BioCyciRLEG395492:GJB3-1921-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 2 hits.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
ProtoNetiSearch...

Entry informationi

Entry nameiB5ZQR5_RHILW
AccessioniPrimary (citable) accession number: B5ZQR5
Entry historyi
Integrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: November 30, 2016
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.