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B5ZQR5 (B5ZQR5_RHILW) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length553 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B5ZQR5 [UniParc].

Last modified November 25, 2008. Version 1.
Checksum: 939A399A3DC2D743

FASTA55363,315
        10         20         30         40         50         60 
MINDLWYKNA VIYCLSVETF MDANGDGVGD FQGLMRRLDY LSGLGVTAIW LMPFQTSPGR 

        70         80         90        100        110        120 
DDGYDVSDYY NVDPRYGSLG DFVEFTHGAK QRGIRVLIDL VINHTSKDHP WFQGARSDPH 

       130        140        150        160        170        180 
SPYRDWYVWS EKKPANADQG MVFPGVQKTT WTHDEKARAY YFHRFYDHQP DLNTSNPEVQ 

       190        200        210        220        230        240 
AEILKIMGFW IQLGVSGFRM DAAPFIIATK GADVSKPVEQ FDMLRKFREF LQWRLGDSII 

       250        260        270        280        290        300 
LAEANILPKD NFEYFGNDGD RMQMMFNFQV NQALFYALAS ADTRPLKKAM ETTKPRPATA 

       310        320        330        340        350        360 
QWGLFLRNHD ELDLGRLSEK QRGAVFAAFG PEKDMQLYDR GIRRRLAPML GGDRRRIEMA 

       370        380        390        400        410        420 
YSLLFSLPGT PVIRYGDEIG MGDDLTLPER NCARTPMQWS TEPEGGFTKS RKPVSPVIKD 

       430        440        450        460        470        480 
GPYGFQHVNV AEQRRDPNSL LNWTERMIRM RKEAPEIGWG DFAVVDTGDD GVLALRYDWR 

       490        500        510        520        530        540 
GNSVLILHNL HGQPSEVTFD PDVGEDGRQL IDIADGASSE ADEKGFHTVR LDAYGYRWYR 

       550 
VGGLDYLLRR REI 

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References

[1]"Complete sequence of chromosome of Rhizobium leguminosarum bv. trifolii WSM2304."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Yates R. expand/collapse author list , Ardley J., Tiwari R.P., O'Hara G., Howieson J., Brau L., Reeve W.
Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: WSM2304.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001191 Genomic DNA. Translation: ACI55193.1.
RefSeqYP_002281419.1. NC_011369.1.

3D structure databases

ProteinModelPortalB5ZQR5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING395492.Rleg2_1908.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACI55193; ACI55193; Rleg2_1908.
GeneID6980647.
KEGGrlt:Rleg2_1908.
PATRIC23127858. VBIRhiLeg95088_3751.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000220639.
KOK05343.
OMAEIGWGDF.
OrthoDBEOG6RVFV2.
ProtClustDBCLSK2394072.

Enzyme and pathway databases

BioCycRLEG395492:GJB3-1939-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
ProtoNetSearch...

Entry information

Entry nameB5ZQR5_RHILW
AccessionPrimary (citable) accession number: B5ZQR5
Entry history
Integrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: November 13, 2013
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)