B5ZQ47 (GLGA_RHILW) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Glycogen synthase
EC=2.4.1.21

Alternative name(s):
Starch [bacterial glycogen] synthase

Gene names

Name:	glgA
Ordered Locus Names:	Rleg2_3350

Organism

Rhizobium leguminosarum bv. trifolii (strain WSM2304) [Complete proteome] [HAMAP]

Taxonomic identifier

395492 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium

Protein attributes

Sequence length	480 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP MF_00484
Catalytic activity	ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP MF_00484
Pathway	Glycan biosynthesis; glycogen biosynthesis. HAMAP MF_00484
Sequence similarities	Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
Biological process	Glycogen biosynthesis
Molecular function	Glycosyltransferase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycogen biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	starch synthase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 480	480	Glycogen synthase HAMAP MF_00484		PRO_1000126093
Sites
	Binding site	15	1	ADP-glucose By similarity

Sequences

	Sequence		Length	Mass (Da)
	B5ZQ47 [UniParc]. Last modified November 25, 2008. Version 1. Checksum: 105BADC332F0DB69	FASTA	480	52,019
	10 20 30 40 50 60 MKVLSVSSEV FPLIKTGGLA DVSGALPIAL KAFGVETKTL LPGYPAVMKV IRDPVVRLEF 70 80 90 100 110 120 PDLLGEPAAV LEVQHEGLDL LILDAPAYYD RPGGPYVDPL GKDYPDNWRR FAALSLAASE 130 140 150 160 170 180 IAAGLLPGWR PDLVHTHDWQ AALTSVYMRY YPTPELPSVL TIHNIAFQGQ FGPEIFPGLR 190 200 210 220 230 240 LPAHAFATDS IEYYGTVGYL KGGLQTAHAI TTVSPTYADE ILTPEFGMGL EGVIASHIDN 250 260 270 280 290 300 LHGIVNGIDT DIWNPATDPV VHTHYGPTTL KNREENRRSI AEFFHLDNDD APIFCVISRL 310 320 330 340 350 360 TWQKGMDIVA NIADEIVAMG GKLVVLGSGE AALEGALLAS ASRHPGRIGV SIGYNEPMSH 370 380 390 400 410 420 LMQAGCDAII IPSRFEPCGL TQLYGLRYGC VPIVARTGGL NDTVIDANHA ALAAKVATGI 430 440 450 460 470 480 QFSPVTETGM LQAIRRAMHF YADRKLWTQL QKQGMKSDVS WEKSAERYAA LYSSLVSKGM

References

[1]

"Complete sequence of chromosome of Rhizobium leguminosarum bv. trifolii WSM2304." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Yates R. , Ardley J., Tiwari R.P., O'Hara G., Howieson J., Brau L., Reeve W. Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: WSM2304.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001191 Genomic DNA. Translation: ACI56617.1.
RefSeq	YP_002282843.1. NC_011369.1.
3D structure databases
ProteinModelPortal	B5ZQ47.
SMR	B5ZQ47. Positions 1-478.
ModBase	Search...
Protein-protein interaction databases
STRING	B5ZQ47.
Protein family/group databases
CAZy	GT5. Glycosyltransferase Family 5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6982104.
GenomeReviews	Gene locus Rleg2_3350 in contig CP001191_GR.
KEGG	rlt:Rleg2_3350.
PATRIC	23130924. VBIRhiLeg95088_5271.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG596384.
OMA	DWQAGLV.
ProtClustDB	PRK00654.
Family and domain databases
HAMAP	MF_00484. Glycogen_synth. [Tree]
InterPro	IPR001296. Glyco_trans_1. IPR011835. Glycogen/starch_synth. IPR013534. Starch_synth_cat_dom. [Graphical view]
KO	K00703.
Pfam	PF08323. Glyco_transf_5. 1 hit. PF00534. Glycos_transf_1. 1 hit. [Graphical view]
TIGRFAMs	TIGR02095. GlgA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

GLGA_RHILW

Accession

Primary (citable) accession number: B5ZQ47

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 14, 2009
Last sequence update:	November 25, 2008
Last modified:	January 25, 2012
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program