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B5ZPZ9 (B5ZPZ9_RHILW) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Triosephosphate isomerase 1 HAMAP MF_00147
Short name=TIM 1 HAMAP MF_00147
EC=5.3.1.1 HAMAP MF_00147
Alternative name(s):
Triose-phosphate isomerase 1 HAMAP MF_00147
Gene names
Name:tpiA1 HAMAP MF_00147
Ordered Locus Names:Rleg2_1834
OrganismRhizobium leguminosarum bv. trifolii (strain WSM2304) [Complete proteome] [HAMAP]
Taxonomic identifier395492 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium

Protein attributes

Sequence length256 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

D-glyceraldehyde 3-phosphate = glycerone phosphate. HAMAP MF_00147 RuleBase RU000517

Pathway

Carbohydrate biosynthesis; gluconeogenesis. HAMAP MF_00147 RuleBase RU003527

Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate from glycerone phosphate: step 1/1. HAMAP MF_00147 RuleBase RU003527

Subunit structure

Homodimer By similarity. HAMAP MF_00147

Subcellular location

Cytoplasm By similarity HAMAP MF_00147.

Sequence similarities

Belongs to the triosephosphate isomerase family. RuleBase RU004162 HAMAP MF_00147

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site991Electrophile By similarity HAMAP MF_00147
Active site1691Proton acceptor By similarity HAMAP MF_00147
Binding site121Substrate By similarity HAMAP MF_00147
Binding site141Substrate By similarity HAMAP MF_00147

Sequences

Sequence LengthMass (Da)Tools
B5ZPZ9 [UniParc].

Last modified November 25, 2008. Version 1.
Checksum: 3CC4B599D231CA3F

FASTA25626,691
        10         20         30         40         50         60 
MTPDVRPLVA GNWKMNGMRA SLDQIKAIAE GVSSPLADKV EALICPPATL LYVATALCTD 

        70         80         90        100        110        120 
SPLSIGAQDC HQNPSGAHTG DISAEMIADC FGTYVIVGHS ERRTDHAETD HLVRAKAEAA 

       130        140        150        160        170        180 
FAAGLTAIIC IGETADERRT GQALDVIKRQ LSASVPDSAA AENTVIAYEP IWAIGTGVTP 

       190        200        210        220        230        240 
TAGDVEKAHA FMRAELVGRF GGEGRKMRLL YGGSVKPANA GELMGIANVD GALIGGASLK 

       250 
AADFLAIYRA YEALLA

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References

[1]"Complete sequence of chromosome of Rhizobium leguminosarum bv. trifolii WSM2304."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Yates R. expand/collapse author list , Ardley J., Tiwari R.P., O'Hara G., Howieson J., Brau L., Reeve W.
Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: WSM2304.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001191 Genomic DNA. Translation: ACI55119.1.
RefSeqYP_002281345.1. NC_011369.1.

3D structure databases

ProteinModelPortalB5ZPZ9.
ModBaseSearch...

Protein-protein interaction databases

STRINGB5ZPZ9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6980572.
GenomeReviewsGene locus Rleg2_1834 in contig CP001191_GR.
KEGGrlt:Rleg2_1834.
PATRIC23127702. VBIRhiLeg95088_3674.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG708281.
OMAIEKNGTM.
ProtClustDBPRK00042.

Family and domain databases

HAMAPMF_00147_B. TIM_B.
[Tree]
InterProIPR013785. Aldolase_TIM.
IPR022896. TrioseP_Isoase_bac/euk.
IPR000652. Triosephosphate_isomerase.
IPR020861. Triosephosphate_isomerase_AS.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01803.
PANTHERPTHR21139. Triophos_ismrse. 1 hit.
PfamPF00121. TIM. 1 hit.
[Graphical view]
SUPFAMSSF51351. Triophos_ismrse. 1 hit.
TIGRFAMsTIGR00419. Tim. 1 hit.
PROSITEPS00171. TIM_1. 1 hit.
PS51440. TIM_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB5ZPZ9_RHILW
AccessionPrimary (citable) accession number: B5ZPZ9
Entry history
Integrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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