B5ZPM5 (B5ZPM5_RHILW) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Translation initiation factor IF-1 EMBL ACI53542.1

Gene names

Ordered Locus Names:

Rleg2_0242

Organism

Rhizobium leguminosarum bv. trifolii (strain WSM2304) [Complete proteome] [HAMAP]

Taxonomic identifier

395492 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium

Protein attributes

Sequence length	72 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Contains 1 S1-like domain. RuleBase RU004366

Ontologies

Keywords
Biological process	Protein biosynthesis
Molecular function	Initiation factor EMBL ACI53542.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	translation initiation factor activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B5ZPM5 [UniParc]. Last modified November 25, 2008. Version 1. Checksum: 80543208323332D6	FASTA	72	8,382
	10 20 30 40 50 60 MPKEEVLEFP GIVTELLPNA TFRVKLENEH EIIAHTAGRM RKNRIRVLAG DKVLVEMTPY 70 DLTKGRITYR FK

References

[1]

"Complete sequence of chromosome of Rhizobium leguminosarum bv. trifolii WSM2304." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Yates R. , Ardley J., Tiwari R.P., O'Hara G., Howieson J., Brau L., Reeve W. Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: WSM2304.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001191 Genomic DNA. Translation: ACI53542.1.
RefSeq	YP_002279768.1. NC_011369.1.
3D structure databases
ProteinModelPortal	B5ZPM5.
SMR	B5ZPM5. Positions 3-70.
ModBase	Search...
Protein-protein interaction databases
STRING	B5ZPM5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6978955.
GenomeReviews	Gene locus Rleg2_0242 in contig CP001191_GR.
KEGG	rlt:Rleg2_0242.
PATRIC	23124280. VBIRhiLeg95088_1988.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG286099.
OMA	VQLDAGH.
ProtClustDB	PRK00276.
Family and domain databases
HAMAP	MF_00075. IF_1. [Tree]
InterPro	IPR012340. NA-bd_OB-fold. IPR016027. NA-bd_OB-fold-like. IPR022967. RNA-binding_domain_S1. IPR006196. RNA-binding_domain_S1_IF1. IPR004368. TIF_IF1. [Graphical view]
Gene3D	G3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
KO	K02518.
Pfam	PF01176. eIF-1a. 1 hit. [Graphical view]
SMART	SM00316. S1. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR00008. InfA. 1 hit.
PROSITE	PS50832. S1_IF1_TYPE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B5ZPM5_RHILW

Accession

Primary (citable) accession number: B5ZPM5

Entry history

Integrated into UniProtKB/TrEMBL:	November 25, 2008
Last sequence update:	November 25, 2008
Last modified:	December 14, 2011
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)