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B5ZB89 (B5ZB89_UREU1) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Arginine--tRNA ligase HAMAP MF_00123
EC=6.1.1.19 HAMAP MF_00123
Alternative name(s):
Arginyl-tRNA synthetase HAMAP MF_00123
Gene names
Name:argS HAMAP MF_00123 EMBL ACI59798.1
Ordered Locus Names:UUR10_0276
OrganismUreaplasma urealyticum serovar 10 (strain ATCC 33699 / Western) [Complete proteome] [HAMAP]
Taxonomic identifier565575 [NCBI]
Taxonomic lineageBacteria › Tenericutes › Mollicutes › Mycoplasmataceae › Ureaplasma

Protein attributes

Sequence length548 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg). HAMAP MF_00123

Subunit structure

Monomer By similarity. HAMAP MF_00123

Subcellular location

Cytoplasm By similarity HAMAP MF_00123.

Sequence similarities

Belongs to the class-I aminoacyl-tRNA synthetase family. HAMAP MF_00123

Ontologies

Keywords
   Biological processProtein biosynthesis HAMAP MF_00123
   Cellular componentCytoplasm HAMAP MF_00123
   LigandATP-binding HAMAP MF_00123
Nucleotide-binding
   Molecular functionAminoacyl-tRNA synthetase HAMAP MF_00123 EMBL ACI59798.1
Ligase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processarginyl-tRNA aminoacylation

Inferred from electronic annotation. Source: HAMAP

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionATP binding

Inferred from electronic annotation. Source: HAMAP

arginine-tRNA ligase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Motif121 – 13111"HIGH" region By similarity HAMAP MF_00123

Sequences

Sequence LengthMass (Da)Tools
B5ZB89 [UniParc].

Last modified November 25, 2008. Version 1.
Checksum: 479EACEA55BAB7CF

FASTA54863,271
        10         20         30         40         50         60 
MMITQKISEQ LSKALEKMGI FETKVLVDKT KNIKFGDFYT NVAMTLSKRV NQSPLVVAKE 

        70         80         90        100        110        120 
IINNLDQDLF FKVNLQPPGF LNFTLKAKDH EDLLTQIYDQ KDLFGQFAKK NITYNVEYVS 

       130        140        150        160        170        180 
ANPTGYLHIA HAANAIYGDI LANLLKIYGY DVKTEYWIND AGNQIDKLAM SVLVRYLQLQ 

       190        200        210        220        230        240 
NINIELPTDA YHGQEIYLVA QALYEIYKDQ FINVRLNEKE EIDDVIVNEQ IKKFAVSYLL 

       250        260        270        280        290        300 
DEIKKDLASI NTYIDTYTSE NWIRSSGRIL EVLSKIKQHT YTLDGALWLR TTAFGDDKDR 

       310        320        330        340        350        360 
VLIKSDGSYT YFTPDIAYHD YKFSKDNTTK LIDVWGTDHL GYIARLKAAM SALGYDPNNL 

       370        380        390        400        410        420 
EIVCAQVMKL VKNNEEFKLS KRSGQSLTIK DLVEIIGKDA LRWFLGSSSM NSHVVIDVDI 

       430        440        450        460        470        480 
ALSKNNNNPL YYVQYAHARA NQVLNKQVYE FDFKTDLLIE TRERELLNQL HFYKQTIANA 

       490        500        510        520        530        540 
ANNREPHRIS NYLYDLAQIF HNYYANIKIN DENNKALSAQ RYTLVWCVKQ VLANGLAIMK 


ITPYDQMY

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References

[1]"Genome sequence of Ureaplasma urealyticum serovar 10 ATCC-33699."
Shrivastava S., Methe B.A., Glass J., White K., Duffy L.B.
Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001184 Genomic DNA. Translation: ACI59798.1.
RefSeqYP_002284679.1. NC_011374.1.

3D structure databases

ProteinModelPortalB5ZB89.
ModBaseSearch...

Protein-protein interaction databases

STRINGB5ZB89.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6983830.
GenomeReviewsGene locus UUR10_0276 in contig CP001184_GR.
KEGGuue:UUR10_0276.
PATRIC20535394. VBIUreUre98799_0267.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG695395.
OMAETIRGCL.
PhylomeDBB5ZB89.
ProtClustDBPRK01611.

Enzyme and pathway databases

BioCycUURE95664:UUR10_0276-MONOMER.

Family and domain databases

HAMAPMF_00123. Arg_tRNA_synth.
[Tree]
InterProIPR001278. Arg-tRNA-synth_Ia.
IPR015945. Arg-tRNA-synth_Ia_core.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view]
Gene3DG3DSA:3.30.1360.70. Arg-tRNA-synth_Ic_N. 1 hit.
G3DSA:3.40.50.620. Rossmann-like_a/b/a_fold. 1 hit.
KOK01887.
PANTHERPTHR11956. Arg_tRNA-synt_1c. 1 hit.
PfamPF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
[Graphical view]
PRINTSPR01038. TRNASYNTHARG.
SMARTSM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
[Graphical view]
SUPFAMSSF55190. Arg-tRNA-synth_Ic_N. 1 hit.
SSF47323. tRNAsyn_1a_bind. 1 hit.
TIGRFAMsTIGR00456. ArgS. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB5ZB89_UREU1
AccessionPrimary (citable) accession number: B5ZB89
Entry history
Integrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: January 25, 2012
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info