B5ZAB0 (B5ZAB0_HELPG) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Pseudouridine synthase RuleBase RU003886
EC=5.4.99.- RuleBase RU003886

Gene names

Ordered Locus Names:

HPG27_324 EMBL ACI27090.1

Organism

Helicobacter pylori (strain G27) [Complete proteome] [HAMAP] EMBL ACI27090.1

Taxonomic identifier

563041 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Epsilonproteobacteria › Campylobacterales › Helicobacteraceae › Helicobacter › Helicobacter pylori

Protein attributes

Sequence length	297 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the pseudouridine synthase rluA family. RuleBase RU004243

Ontologies

Keywords
Molecular function	Isomerase RuleBase RU003886
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	pseudouridine synthesis Inferred from electronic annotation. Source: InterPro
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro pseudouridine synthase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B5ZAB0 [UniParc]. Last modified November 25, 2008. Version 1. Checksum: 4D877E22648DA8AA	FASTA	297	33,951
	10 20 30 40 50 60 MPFVEEEFEI LKPTKALFFV RDVLKCSLKE AQRHLDKQRL KQNQQAVRKS QMIQGVVRLI 70 80 90 100 110 120 HFKPNEKAQA LVFETKDFGV FDKPAQVYTH PKGYFYHESL LDCIQSHLGK NAHPAHRLDY 130 140 150 160 170 180 ETSGLVLAGK TLQSVKDLKA LFMQKKVKKT YLALAHGLVE KSMKIDKPIL TLQNIQKDLR 190 200 210 220 230 240 IRSQISPLGK PSITLVESLS YDPFLDISLL KITPLTGRTH QIRLHLSSVG HRIVGEGLYG 250 260 270 280 290 VADEEARGYL QLKRENHAPL LMLHAASLEF EFKGAIYQIA SPMPERFMPF LKDLPLF

References

[1]

"The complete genome sequence of Helicobacter pylori strain G27." Baltrus D.A., Amieva M.R., Covacci A., Lowe T.M., Merrell D.S., Ottemann K.M., Stein M., Salama N.R., Guillemin K. J. Bacteriol. 191:447-448(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: G27 EMBL ACI27090.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001173 Genomic DNA. Translation: ACI27090.1.
RefSeq	YP_002265956.1. NC_011333.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	563041.HPG27_324.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACI27090; ACI27090; HPG27_324.
GeneID	6963211.
KEGG	hpg:HPG27_324.
PATRIC	20598602. VBIHelPyl113476_0359.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0564.
HOGENOM	HOG000275921.
KO	K06180.
OMA	RENHAPL.
ProtClustDB	CLSK872338.
Family and domain databases
InterPro	IPR020103. PsdUridine_synth_cat_dom. IPR006224. PsdUridine_synth_RluC/D_CS. IPR006145. PsdUridine_synth_RsuA/RluD. [Graphical view]
Pfam	PF00849. PseudoU_synth_2. 1 hit. [Graphical view]
SUPFAM	SSF55120. PsdUridine_synth_cat_dom. 1 hit.
PROSITE	PS01129. PSI_RLU. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B5ZAB0_HELPG

Accession

Primary (citable) accession number: B5ZAB0

Entry history

Integrated into UniProtKB/TrEMBL:	November 25, 2008
Last sequence update:	November 25, 2008
Last modified:	May 1, 2013
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)