B5Z6D9 (B5Z6D9_HELPG) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
3-deoxy-D-manno-octulosonicacid 8-phosphate synthetase EMBL ACI26779.1

Gene names

Ordered Locus Names:

HPG27_3

Organism

Helicobacter pylori (strain G27) [Complete proteome] [HAMAP] EMBL ACI26779.1

Taxonomic identifier

563041 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Epsilonproteobacteria › Campylobacterales › Helicobacteraceae › Helicobacter

Protein attributes

Sequence length	244 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Phosphoenolpyruvate + D-arabinose 5-phosphate + H2O = 2-dehydro-3-deoxy-D-octonate 8-phosphate + phosphate. SAAS SAAS006269
Pathway	Bacterial outer membrane biogenesis; lipopolysaccharide biosynthesis. SAAS SAAS006269 Carbohydrate biosynthesis; 3-deoxy-D-manno-octulosonate biosynthesis; 3-deoxy-D-manno-octulosonate from D-ribulose 5-phosphate: step 2/3. SAAS SAAS006269
Subcellular location	Cytoplasm By similarity SAAS SAAS006269.

Ontologies

Keywords
Biological process	Lipopolysaccharide biosynthesis SAAS SAAS006269
Cellular component	Cytoplasm SAAS SAAS006269
Molecular function	Transferase SAAS SAAS006269
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	arginine biosynthetic process Inferred from electronic annotation. Source: InterPro lipopolysaccharide biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	3-deoxy-8-phosphooctulonate synthase activity Inferred from electronic annotation. Source: InterPro glutamate N-acetyltransferase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B5Z6D9 [UniParc]. Last modified November 25, 2008. Version 1. Checksum: 9302A52929485C49	FASTA	244	26,905
	10 20 30 40 50 60 MQPLANNERL DFYFKASFDK ANRTSLESYR GPGLEKGLEM LQTIKEEFGY KILTDVHESH 70 80 90 100 110 120 QASVAAKVAD ILQIPAFLCR QTDLIVEVSQ TDAIVNIKKG QFMNPKDMQY SVLKALKTRD 130 140 150 160 170 180 KSIQSPTYEA ALKNGVWLCE RGSSFGYGNL VVDMRSLKIM REFAPVIFDA THSVQMPGGA 190 200 210 220 230 240 NGKSSGDSSF APILARAAAA VGIDGLFAET HIDPKNALSD GANMLKPDEL EHLVTDMLKI QNLF

References

[1]

"The complete genome sequence of Helicobacter pylori strain G27." Baltrus D.A., Amieva M.R., Covacci A., Lowe T.M., Merrell D.S., Ottemann K.M., Stein M., Salama N.R., Guillemin K. J. Bacteriol. 191:447-448(2009) [PubMed: 18952803] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001173 Genomic DNA. Translation: ACI26779.1.
RefSeq	YP_002265645.1. NC_011333.1.
3D structure databases
ProteinModelPortal	B5Z6D9.
ModBase	Search...
Protein-protein interaction databases
STRING	B5Z6D9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6962880.
GenomeReviews	Gene locus HPG27_3 in contig CP001173_GR.
KEGG	hpg:HPG27_3.
PATRIC	20597868. VBIHelPyl113476_0003.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG575990.
OMA	HENEQCA.
ProtClustDB	PRK05198.
Family and domain databases
InterPro	IPR013785. Aldolase_TIM. IPR002813. Arg_biosynth_ArgJ. IPR006218. DAHP1/KDSA. IPR006269. KDO8P_synthase. [Graphical view]
Gene3D	G3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KO	K01627.
PANTHER	PTHR21057:SF2. KDO8P_synthase. 1 hit.
Pfam	PF00793. DAHP_synth_1. 1 hit. [Graphical view]
ProDom	PD004193. Arg_biosynth_ArgJ. 1 hit. [Graphical view] [Entries sharing at least one domain]
TIGRFAMs	TIGR01362. KDO8P_synth. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B5Z6D9_HELPG

Accession

Primary (citable) accession number: B5Z6D9

Entry history

Integrated into UniProtKB/TrEMBL:	November 25, 2008
Last sequence update:	November 25, 2008
Last modified:	December 14, 2011
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)