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B5Z4D9 (B5Z4D9_ECO5E) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Exodeoxyribonuclease V, gamma subunit EMBL ACI35562.1
Gene names
Name:recC EMBL ACI35562.1
Ordered Locus Names:ECH74115_4087 EMBL ACI35562.1
OrganismEscherichia coli O157:H7 (strain EC4115 / EHEC) [Complete proteome] [HAMAP] EMBL ACI35562.1
Taxonomic identifier444450 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia ›

Protein attributes

Sequence length1122 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentexodeoxyribonuclease V complex

Inferred from electronic annotation. Source: InterPro

   Molecular_functionexodeoxyribonuclease V activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B5Z4D9 [UniParc].

Last modified November 25, 2008. Version 1.
Checksum: 9F04CEDE5277C9AF

FASTA1,122128,746
        10         20         30         40         50         60 
MLRVYHSNRL DVLEALMEFI VERERLDDPF EPEMILVQST GMAQWLQMTL SQKFGIAANI 

        70         80         90        100        110        120 
DFPLPASFIW DMFVRVLPEI PKESAFNKQS MSWKLMTLLP QLLEREDFTL LRHYLTDDSD 

       130        140        150        160        170        180 
KRKLFQLSSK AADLFDQYLV YRPDWLAQWE TGHLVEGLGE AQAWQAPLWK ALVEYTHELG 

       190        200        210        220        230        240 
QPRWHRANLY QRFIETLESA TTCPPGLPSR VFICGISALP PVYLQALQAL GKHIEIHLLF 

       250        260        270        280        290        300 
TNPCRYYWGD IKDPAYLAKL LTRQRRHSFE DRELPLFRDS ENAGQLFNSD GEQDVGNPLL 

       310        320        330        340        350        360 
ASWGKLGRDY IYLLSDLESS QELDAFVDVT PDNLLHNIQS DILELENRAV AGVNIEEFSR 

       370        380        390        400        410        420 
SDNKRPLDPL DSSITFHVCH SPQREVEVLH DRLLAMLEED PTLTPRDIIV MVADIDSYSP 

       430        440        450        460        470        480 
FIQAVFGSAP ADRYLPYAIS DRRARQSHPV LEAFISLLSL PDSRFVSEDV LALLDVPVLA 

       490        500        510        520        530        540 
ARFDITEEGL RYLRQWVNES GIRWGIDDDN VRELELPATG QHTWRFGLTR MLLGYAMESA 

       550        560        570        580        590        600 
QGEWQSVLPY DESSGLIAEL VGHLASLLMQ LNIWRRGLAQ ERPLEEWLPV CRDMLNALFL 

       610        620        630        640        650        660 
PDAETEAAMT LIEQQWQAII AEGLGAQYGD AVPLSLLRDE LAQRLDQERI SQRFLAGPVN 

       670        680        690        700        710        720 
ICTLMPMRSI PFKVVCLLGM NDGVYPRQLA PLGFDLMSQK PKRGDRSRRD DDRYLFLEAL 

       730        740        750        760        770        780 
ISAQQKLYIS YIGRSIQDNS ERFPSVLVQE LIDYIGQSHY LPGDEALNCD ESEARVKAHL 

       790        800        810        820        830        840 
TCLHTRMPFD PQNYQPGERQ SYAREWLPAA SQAGKAHSEF VQPLPFTLPE TVPLETLQRF 

       850        860        870        880        890        900 
WAHPVRAFFQ MRLQVNFRTE DSEIPDTEPF ILEGLSRYQI NQQLLNALVE QDDAERLFRR 

       910        920        930        940        950        960 
FRAAGDLPYG AFGEIFWETQ CQEMQQLADR VIACRQPGQS MEIDLACNGV QITGWLPQVQ 

       970        980        990       1000       1010       1020 
PDGLLRWRPS LLSVAQGMQL WLEHLVYCAS GGNGESRLFL RKDGEWRFPP LAAEQALHYL 

      1030       1040       1050       1060       1070       1080 
SQLIEGYREG MSAPLLVLPE SGGAWLKTCY DAQNDAMLDD DSTLQKARTK FLQAYEGNMM 

      1090       1100       1110       1120 
VSGEGDDIWY QRLWRQLTPE TMEAIVEQSQ RFLLPLFRFN QS

« Hide

References

[1]"Complete genome sequence of Escherichia coli O157:H7 str. EC4115."
Eppinger M., Sebastian Y., Ravel J.
Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: EC4115 / EHEC.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001164 Genomic DNA. Translation: ACI35562.1.
RefSeqYP_002272285.1. NC_011353.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING444450.ECH74115_4087.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACI35562; ACI35562; ECH74115_4087.
GeneID6968678.
KEGGecf:ECH74115_4087.
PATRIC18368795. VBIEscCol74651_4025.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1330.
HOGENOMHOG000258319.
KOK03583.
OMANGIAQWL.
ProtClustDBPRK11069.

Enzyme and pathway databases

BioCycECOL444450:GHOB-4074-MONOMER.

Family and domain databases

Gene3D1.10.10.160. 1 hit.
InterProIPR013986. DExx_box_DNA_helicase_dom.
IPR006697. ExoDNase_V_gsu.
IPR027417. P-loop_NTPase.
IPR011335. Restrct_endonuc-II-like.
[Graphical view]
PIRSFPIRSF000980. RecC. 1 hit.
SUPFAMSSF52980. Restrict_endonuc_II-like_core. 1 hit.
SSF52540. SSF52540. 2 hits.
TIGRFAMsTIGR01450. recC. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB5Z4D9_ECO5E
AccessionPrimary (citable) accession number: B5Z4D9
Entry history
Integrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: May 29, 2013
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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