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Protein

30S ribosomal protein S20

Gene

rpsT

Organism
Escherichia coli O157:H7 (strain EC4115 / EHEC)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Binds directly to 16S ribosomal RNA.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S20UniRule annotation
Gene namesi
Name:rpsTUniRule annotation
Ordered Locus Names:ECH74115_0026
OrganismiEscherichia coli O157:H7 (strain EC4115 / EHEC)
Taxonomic identifieri444450 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10001264391 – 8730S ribosomal protein S20Add BLAST87

Structurei

3D structure databases

ProteinModelPortaliB5YYB6.
SMRiB5YYB6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the bacterial ribosomal protein bS20 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000097048.
KOiK02968.
OMAiANKKSAM.

Family and domain databases

Gene3Di1.20.58.110. 1 hit.
HAMAPiMF_00500. Ribosomal_S20. 1 hit.
InterProiView protein in InterPro
IPR002583. Ribosomal_S20.
IPR036510. Ribosomal_S20_sf.
PANTHERiPTHR33398. PTHR33398. 1 hit.
PfamiView protein in Pfam
PF01649. Ribosomal_S20p. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD004231. Ribosomal_S20. 1 hit.
SUPFAMiSSF46992. SSF46992. 1 hit.
TIGRFAMsiTIGR00029. S20. 1 hit.

Sequencei

Sequence statusi: Complete.

B5YYB6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MANIKSAKKR AIQSEKARKH NASRRSMMRT FIKKVYAAIE AGDKAAAQKA
60 70 80
FNEMQPIVDR QAAKGLIHKN KAARHKANLT AQINKLA
Length:87
Mass (Da):9,684
Last modified:November 25, 2008 - v1
Checksum:iF02154BE2D1E22D9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001164 Genomic DNA. Translation: ACI38560.1.
RefSeqiWP_001274021.1. NC_011353.1.

Genome annotation databases

EnsemblBacteriaiACI38560; ACI38560; ECH74115_0026.
KEGGiecf:ECH74115_0026.

Similar proteinsi

Entry informationi

Entry nameiRS20_ECO5E
AccessioniPrimary (citable) accession number: B5YYB6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: November 25, 2008
Last modified: October 25, 2017
This is version 55 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families