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B5YX30

- GLPB_ECO5E

UniProt

B5YX30 - GLPB_ECO5E

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Protein
Anaerobic glycerol-3-phosphate dehydrogenase subunit B
Gene
glpB, ECH74115_3379
Organism
Escherichia coli O157:H7 (strain EC4115 / EHEC)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor By similarity.UniRule annotation

Catalytic activityi

sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol.UniRule annotation

Cofactori

FMN By similarity.UniRule annotation

Pathwayi

GO - Molecular functioni

  1. sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

  1. glycerol catabolic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Keywords - Ligandi

Flavoprotein, FMN

Enzyme and pathway databases

BioCyciECOL444450:GHOB-3371-MONOMER.
UniPathwayiUPA00618; UER00673.

Names & Taxonomyi

Protein namesi
Recommended name:
Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC:1.1.5.3)
Short name:
Anaerobic G-3-P dehydrogenase subunit B
Short name:
Anaerobic G3Pdhase B
Gene namesi
Name:glpB
Ordered Locus Names:ECH74115_3379
OrganismiEscherichia coli O157:H7 (strain EC4115 / EHEC)
Taxonomic identifieri444450 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000001737: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 419419Anaerobic glycerol-3-phosphate dehydrogenase subunit BUniRule annotation
PRO_1000133356Add
BLAST

Interactioni

Subunit structurei

Composed of a catalytic GlpA/B dimer and of membrane bound GlpC By similarity.

Protein-protein interaction databases

STRINGi444450.ECH74115_3379.

Structurei

3D structure databases

ProteinModelPortaliB5YX30.
SMRiB5YX30. Positions 2-59, 257-313, 355-415.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG3075.
HOGENOMiHOG000278489.
KOiK00112.
OMAiFRSVNIS.
OrthoDBiEOG6K6V62.

Family and domain databases

HAMAPiMF_00753. Glycerol3P_GlpB.
InterProiIPR003953. FAD_bind_dom.
IPR009158. G3P_DH_GlpB_su.
[Graphical view]
PfamiPF00890. FAD_binding_2. 1 hit.
[Graphical view]
PIRSFiPIRSF000141. Anaerobic_G3P_dh. 1 hit.
TIGRFAMsiTIGR03378. glycerol3P_GlpB. 1 hit.

Sequencei

Sequence statusi: Complete.

B5YX30-1 [UniParc]FASTAAdd to Basket

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MRFDTIIMGG GLAGLLCGLQ LQKHGLRCAI VTRGQSALHF SSGSLDLLSH    50
LPDGQAVTDI HSGLESLRQQ APAHPYSLLG PQRVLDLACQ AQALIAESGA 100
QLQGSVELPH QRITPLGTLR STWLSSPEVP VWPLPAKKIC VVGISGLMDF 150
QAHLAAASLR ELDLAVETAE IELPELDVLR NNATEFRAVN IARFLDNEEN 200
WPLLLDALIP VANTCEMILM PACFGLADDK LWRWLNEKLP CSLMLLPTLP 250
PSVLGIRLQN QLQRQFVRQG GVWMPGDEVK KVTCKNGVVN EIWTRNHADI 300
PLRPRFAVLA SGSFFSGGLV AERNGIREPI LGLDVLQTAT RGEWYKGDFF 350
APQPWQQFGV TTDQTLRPSQ AGQTIENLFT IGSVLGGFDP IAQGCGGGVC 400
AVSALHAAQQ IAQRAGGQQ 419
Length:419
Mass (Da):45,400
Last modified:November 25, 2008 - v1
Checksum:i19AC63B458F1BA5D
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001164 Genomic DNA. Translation: ACI36262.1.
RefSeqiYP_002271651.1. NC_011353.1.

Genome annotation databases

EnsemblBacteriaiACI36262; ACI36262; ECH74115_3379.
GeneIDi6969063.
KEGGiecf:ECH74115_3379.
PATRICi18367428. VBIEscCol74651_3366.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001164 Genomic DNA. Translation: ACI36262.1 .
RefSeqi YP_002271651.1. NC_011353.1.

3D structure databases

ProteinModelPortali B5YX30.
SMRi B5YX30. Positions 2-59, 257-313, 355-415.
ModBasei Search...

Protein-protein interaction databases

STRINGi 444450.ECH74115_3379.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACI36262 ; ACI36262 ; ECH74115_3379 .
GeneIDi 6969063.
KEGGi ecf:ECH74115_3379.
PATRICi 18367428. VBIEscCol74651_3366.

Phylogenomic databases

eggNOGi COG3075.
HOGENOMi HOG000278489.
KOi K00112.
OMAi FRSVNIS.
OrthoDBi EOG6K6V62.

Enzyme and pathway databases

UniPathwayi UPA00618 ; UER00673 .
BioCyci ECOL444450:GHOB-3371-MONOMER.

Family and domain databases

HAMAPi MF_00753. Glycerol3P_GlpB.
InterProi IPR003953. FAD_bind_dom.
IPR009158. G3P_DH_GlpB_su.
[Graphical view ]
Pfami PF00890. FAD_binding_2. 1 hit.
[Graphical view ]
PIRSFi PIRSF000141. Anaerobic_G3P_dh. 1 hit.
TIGRFAMsi TIGR03378. glycerol3P_GlpB. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: EC4115 / EHEC.

Entry informationi

Entry nameiGLPB_ECO5E
AccessioniPrimary (citable) accession number: B5YX30
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: November 25, 2008
Last modified: July 9, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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