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B5YVM4

- B5YVM4_ECO5E

UniProt

B5YVM4 - B5YVM4_ECO5E

Protein
Submitted name:

Alpha-amylase, periplasmic

Gene

malS

Organism
Escherichia coli O157:H7 (strain EC4115 / EHEC)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 42 (01 Oct 2014)
      Sequence version 1 (25 Nov 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. alpha-amylase activity Source: InterPro
    2. calcium ion binding Source: InterPro

    GO - Biological processi

    1. alpha-glucan catabolic process Source: InterPro
    2. cellular oligosaccharide catabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciECOL444450:GHOB-4928-MONOMER.

    Protein family/group databases

    CAZyiGH13. Glycoside Hydrolase Family 13.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha-amylase, periplasmicImported
    Gene namesi
    Name:malSImported
    Ordered Locus Names:ECH74115_4947Imported
    OrganismiEscherichia coli O157:H7 (strain EC4115 / EHEC)Imported
    Taxonomic identifieri444450 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
    ProteomesiUP000001737: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. periplasmic space Source: InterPro

    Interactioni

    Protein-protein interaction databases

    STRINGi444450.ECH74115_4947.

    Structurei

    3D structure databases

    ProteinModelPortaliB5YVM4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000273912.
    KOiK01176.
    OMAiGQNWHSF.
    OrthoDBiEOG65QWH3.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    B5YVM4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKLAACFLTL LPGFAVAASW TSPGFPAFSE QGTGTFVSHA QLPKGTRPLT    50
    LNFDQQCWQP ADAIKLNQML SLQPCSNTPP QWRLFRDGKY TLQIDTRSGT 100
    PTLMISIQNA AEPVANLVRE CPKWDGLPLT LDVSATFPEG AAVRDYYSQQ 150
    IAIVKNGQIT LQPAATSNGL LLLERAETDA SAPFDWHNAT VYFVLTDRFE 200
    NGDPSNDQSY GRHKDGMAEI GTFHGGDLRG LTNKLDYLQQ LGVNALWISA 250
    PFEQIHGWVG GGTKGDFPHY AYHGYYTQDW TNLDANMGNE ADLRTLVDSA 300
    HQRGIRILFD VVMNHTGYAT LADMQEYQFG ALYLSGDEVK KTLGERWSDW 350
    KPAAGQTWHS FNDYINFSDK TGWDKWWGKN WIRTDIGDYD NPGFDDLTMS 400
    LAFLPDIKTE STTASGLPVF YKNKTDTHAK AIDGFTPRDY LTHWLSQWVR 450
    DYGIDGFRVD TAKHVELPAW QQLKTEASAA LREWKKANPD KALDDKPFWM 500
    TGEAWGHGVM QSDYYRHGFD AMINFDYQEQ AAKAVDCIAQ MDTTWQQMAE 550
    KLQGFNVLSY LSSHDTRLFR EGGDKAAELL LLAPGAVQIF YGDESSRPFG 600
    PTGSDPLQGT RSDMNWQDVS GKSAANVAHW QKISQFRARH PAIGAGKQTT 650
    LSLKQGYGFV REHGDDKVLV IWAGQQ 676
    Length:676
    Mass (Da):75,676
    Last modified:November 25, 2008 - v1
    Checksum:iFCB885C458F8404F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001164 Genomic DNA. Translation: ACI38491.1.
    RefSeqiYP_002273057.1. NC_011353.1.

    Genome annotation databases

    EnsemblBacteriaiACI38491; ACI38491; ECH74115_4947.
    GeneIDi6968543.
    KEGGiecf:ECH74115_4947.
    PATRICi18370449. VBIEscCol74651_4838.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001164 Genomic DNA. Translation: ACI38491.1 .
    RefSeqi YP_002273057.1. NC_011353.1.

    3D structure databases

    ProteinModelPortali B5YVM4.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 444450.ECH74115_4947.

    Protein family/group databases

    CAZyi GH13. Glycoside Hydrolase Family 13.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACI38491 ; ACI38491 ; ECH74115_4947 .
    GeneIDi 6968543.
    KEGGi ecf:ECH74115_4947.
    PATRICi 18370449. VBIEscCol74651_4838.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000273912.
    KOi K01176.
    OMAi GQNWHSF.
    OrthoDBi EOG65QWH3.

    Enzyme and pathway databases

    BioCyci ECOL444450:GHOB-4928-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: EC4115 / EHECImported.

    Entry informationi

    Entry nameiB5YVM4_ECO5E
    AccessioniPrimary (citable) accession number: B5YVM4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 25, 2008
    Last sequence update: November 25, 2008
    Last modified: October 1, 2014
    This is version 42 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3