B5YPM3 (B5YPM3_ECO5E) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Transcriptional regulator AllR EMBL ACI38915.1

Gene names

Name:	allR EMBL ACI38915.1
Ordered Locus Names:	ECH74115_0607

Organism

Escherichia coli O157:H7 (strain EC4115 / EHEC) [Complete proteome] [HAMAP] EMBL ACI38915.1

Taxonomic identifier

444450 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length	256 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B5YPM3 [UniParc]. Last modified November 25, 2008. Version 1. Checksum: 796B51F2D62C81DF	FASTA	256	27,580
	10 20 30 40 50 60 MAQKGAQALE RGIAILQYLE KSGGSSSVSD ISLNLDLPLS TTFRLLKVLQ AADFVYQDSQ 70 80 90 100 110 120 LGWWHIGLGV FNVGAAYIHN RDVLSVAGPF MRRLMLLSGE TVNVAIRNGN EAVLIGQLEC 130 140 150 160 170 180 KSMVRMCAPL GSRLPLHASG AGKALLYPLA EEELMSIILQ TGLQQFTPTT LVDMPTLLKD 190 200 210 220 230 240 LEQARELGYT VDKEEHVVGL NCIASAIYDD VGSVVAAISI SGPSSRLTED RFVSQGELVR 250 DTARDISTAL GLKAHP

References

[1]	"Complete genome sequence of Escherichia coli O157:H7 str. EC4115." Eppinger M., Sebastian Y., Ravel J. Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001164 Genomic DNA. Translation: ACI38915.1.
RefSeq	YP_002269161.1. NC_011353.1.
3D structure databases
ProteinModelPortal	B5YPM3.
SMR	B5YPM3. Positions 82-254.
ModBase	Search...
Protein-protein interaction databases
STRING	B5YPM3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBESCT00000031471; EBESCP00000030174; EBESCG00000030521.
GeneID	6967609.
GenomeReviews	Gene locus ECH74115_0607 in contig CP001164_GR.
KEGG	ecf:ECH74115_0607.
PATRIC	18362035. VBIEscCol74651_0723.
Organism-specific databases
CMR	Search...
Phylogenomic databases
GeneTree	EBGT00050000008790.
HOGENOM	HBG739407.
OMA	VFRILAT.
ProtClustDB	PRK10163.
Family and domain databases
InterPro	IPR014757. Tscrpt_reg_IclR_C. IPR005471. Tscrpt_reg_IclR_N. IPR011991. WHTH_trsnscrt_rep_DNA-bd. [Graphical view]
Gene3D	G3DSA:1.10.10.10. Wing_hlx_DNA_bd. 1 hit.
KO	K10973.
Pfam	PF09339. HTH_IclR. 1 hit. PF01614. IclR. 1 hit. [Graphical view]
SMART	SM00346. HTH_ICLR. 1 hit. [Graphical view]
PROSITE	PS51077. HTH_ICLR. 1 hit. PS51078. ICLR_ED. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B5YPM3_ECO5E

Accession

Primary (citable) accession number: B5YPM3

Entry history

Integrated into UniProtKB/TrEMBL:	November 25, 2008
Last sequence update:	November 25, 2008
Last modified:	January 25, 2012
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)