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B5YJH4 (B5YJH4_THEYD) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:ligD EMBL ACI20837.1
Ordered Locus Names:THEYE_A0546 EMBL ACI20837.1
OrganismThermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) [Reference proteome] [HAMAP] EMBL ACI20837.1
Taxonomic identifier289376 [NCBI]
Taxonomic lineageBacteriaNitrospiraeNitrospiralesNitrospiraceaeThermodesulfovibrio

Protein attributes

Sequence length138 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ACI20837.1
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Molecular_functionligase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B5YJH4 [UniParc].

Last modified November 25, 2008. Version 1.
Checksum: 210B1E1959C1188D

FASTA13816,030
        10         20         30         40         50         60 
MPYFVVHEHH AKKLHFDLRL EKDGVLKSWA IPKGPSMNPQ DKRLAIQVED HALEYGNFEG 

        70         80         90        100        110        120 
IIPEGQYGAG KVYIWDKGQY STVKGSPEEG QWEIFMEGEI LKGNFVLVKL KGKSDEWLFI 

       130 
KKKDKFADYN FKLKLKFP 

« Hide

References

[1]"The complete genome sequence of Thermodesulfovibrio yellowstonii strain ATCC 51303 / DSM 11347 / YP87."
Dodson R.J., Durkin A.S., Wu M., Eisen J., Sutton G.
Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 51303 / DSM 11347 / YP87.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001147 Genomic DNA. Translation: ACI20837.1.
RefSeqYP_002248389.1. NC_011296.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING289376.THEYE_A0546.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACI20837; ACI20837; THEYE_A0546.
GeneID6943291.
KEGGtye:THEYE_A0546.
PATRIC23908115. VBITheYel104483_0540.

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000046158.
KOK01971.
OMAHEHHAKK.
OrthoDBEOG661H49.

Enzyme and pathway databases

BioCycTYEL289376:GH9L-544-MONOMER.

Family and domain databases

InterProIPR014144. LigD_PE_domain.
[Graphical view]
PfamPF13298. LigD_N. 1 hit.
[Graphical view]
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB5YJH4_THEYD
AccessionPrimary (citable) accession number: B5YJH4
Entry history
Integrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: April 16, 2014
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)