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Protein

Glycogen synthase

Gene

glgA

Organism
Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathway: glycogen biosynthesis

This protein is involved in the pathway glycogen biosynthesis, which is part of Glycan biosynthesis.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway glycogen biosynthesis and in Glycan biosynthesis.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei15 – 151ADP-glucoseUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciTYEL289376:GH9L-1482-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthaseUniRule annotation
Gene namesi
Name:glgAUniRule annotation
Ordered Locus Names:THEYE_A1492
OrganismiThermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87)
Taxonomic identifieri289376 [NCBI]
Taxonomic lineageiBacteriaNitrospiraeNitrospiralesNitrospiraceaeThermodesulfovibrio
ProteomesiUP000000718 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 497497Glycogen synthasePRO_1000126110Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi289376.THEYE_A1492.

Structurei

3D structure databases

ProteinModelPortaliB5YG91.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
InParanoidiB5YG91.
KOiK00703.
OMAiNLQINGM.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

B5YG91-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLALVSAEA YPFSKTGGLG DVVGSLFKEF IKAGIDVTLF LPFYKITRDN
60 70 80 90 100
FSNSVVNAEI VYGAPIGLNT LFGAVRVAKV SVDSDDNLII EPSKKGNLFF
110 120 130 140 150
IEHNNFFDRN ELYGTNHGEY LDNAERFVFF SRAVLEICKI MNLNFDVIHC
160 170 180 190 200
HDWHTALIPL YLKTLYRECS CFEKTKTVLT VHNLGYQGIF PREKLELTGF
210 220 230 240 250
GQEMFHIDGL EFYGMVNFLK GGLFNADIIT TVSPTYAKEI LTPDYGAGLD
260 270 280 290 300
GVLRKRKENL VGIINGIDYK IWNPEEDPFI AKKYGLQNIN DKQKNKEDLI
310 320 330 340 350
ALAGINSSLQ DPIIAFIGRM VYQKGIDIVV DAMPNLIKNG ISFIFEGTGE
360 370 380 390 400
SYYEHKIREL QNSYPSKVFA FIGFDEALAH KIYAGADSLL VPSRYEPCGL
410 420 430 440 450
SQLIAMRYGT IPICRKTGGL SDTVEDKVTG FLFSEYSSSA LTHAISRFIE
460 470 480 490
IYNNKQKFLE MIREAMKRDF SWSNSSKKYI ELYRGLIGER ERKTGTI
Length:497
Mass (Da):56,159
Last modified:November 25, 2008 - v1
Checksum:i80CEC22A2FB9A8F5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001147 Genomic DNA. Translation: ACI21910.1.
RefSeqiWP_012546609.1. NC_011296.1.
YP_002249289.1. NC_011296.1.

Genome annotation databases

EnsemblBacteriaiACI21910; ACI21910; THEYE_A1492.
GeneIDi6941294.
KEGGitye:THEYE_A1492.
PATRICi23910007. VBITheYel104483_1451.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001147 Genomic DNA. Translation: ACI21910.1.
RefSeqiWP_012546609.1. NC_011296.1.
YP_002249289.1. NC_011296.1.

3D structure databases

ProteinModelPortaliB5YG91.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi289376.THEYE_A1492.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACI21910; ACI21910; THEYE_A1492.
GeneIDi6941294.
KEGGitye:THEYE_A1492.
PATRICi23910007. VBITheYel104483_1451.

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
InParanoidiB5YG91.
KOiK00703.
OMAiNLQINGM.
OrthoDBiEOG6JTC6Z.

Enzyme and pathway databases

UniPathwayiUPA00164.
BioCyciTYEL289376:GH9L-1482-MONOMER.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The complete genome sequence of Thermodesulfovibrio yellowstonii strain ATCC 51303 / DSM 11347 / YP87."
    Dodson R.J., Durkin A.S., Wu M., Eisen J., Sutton G.
    Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51303 / DSM 11347 / YP87.

Entry informationi

Entry nameiGLGA_THEYD
AccessioniPrimary (citable) accession number: B5YG91
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: November 25, 2008
Last modified: June 24, 2015
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.