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Protein

Ribosomal RNA small subunit methyltransferase B

Gene

sun

Organism
Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

MethyltransferaseSAAS annotationImported, Transferase

Keywords - Biological processi

rRNA processingSAAS annotation

Keywords - Ligandi

RNA-bindingSAAS annotation, S-adenosyl-L-methionineSAAS annotation

Enzyme and pathway databases

BioCyciDTHE309799:GHF9-1319-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal RNA small subunit methyltransferase BSAAS annotation (EC:2.1.1.-SAAS annotation)
Gene namesi
Name:sunImported
Ordered Locus Names:DICTH_1332Imported
OrganismiDictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12)Imported
Taxonomic identifieri309799 [NCBI]
Taxonomic lineageiBacteriaDictyoglomiDictyoglomalesDictyoglomaceaeDictyoglomus
Proteomesi
  • UP000001733 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm SAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

CytoplasmSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi309799.DICTH_1332.

Structurei

3D structure databases

ProteinModelPortaliB5YF43.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini161 – 430270SAM_MT_RSMB_NOPInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.SAAS annotation

Phylogenomic databases

eggNOGiENOG4105CYJ. Bacteria.
COG0144. LUCA.
HOGENOMiHOG000037300.
KOiK03500.
OMAiPREAPEC.
OrthoDBiPOG091H02E2.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR018314. Fmu/NOL1/Nop2p_CS.
IPR031341. Methyltr_RsmF_N.
IPR001678. MeTrfase_RsmB/NOP2.
IPR011023. Nop2p.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR004573. rRNA_ssu_MeTfrase_B.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF17125. Methyltr_RsmF_N. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00446. nop2p. 1 hit.
TIGR00563. rsmB. 1 hit.
PROSITEiPS01153. NOL1_NOP2_SUN. 1 hit.
PS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B5YF43-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEVRLKAAEI LYDLEKREAY LNLLLRSRLP SYNLSLKEKH FITELVYGVT
60 70 80 90 100
RWKTTLDYIW SRFVKRDNLS LFGRILLRLV AYHIYFLKDT ILPIAVNEIV
110 120 130 140 150
EIAKRKVPKE AKLINAVSRR MVKERNNLDL NLIPFHIRYA IPEFIFEEWQ
160 170 180 190 200
DYIGKGEAVK ILGWLNKAHN IAIRVNTLKI SVEDLKEKLK ERGIKFKDGN
210 220 230 240 250
LVTQALLIED GFDFEKSDLF HNGYFVIQSE ASMLPALILN PEPGSRVIDL
260 270 280 290 300
CSAPGLKSTH LAELMNNKGK IVSVDINKNR VKLVEENAKR LGISIIETLA
310 320 330 340 350
EDVLNLPDSL NGTFDRVLLD APCSGLGVIS HKPEIKWRLK REDIYKLSEM
360 370 380 390 400
QIKMLERAGK LLKKGGRMVY STCTITWHEN ENVVLYFLER NPEFKLIDFF
410 420 430
YKGEKFPGIM RVIPYKYKTD GFFISLIGRE
Length:430
Mass (Da):49,864
Last modified:November 25, 2008 - v1
Checksum:i166B59AED9295A95
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001146 Genomic DNA. Translation: ACI19608.1.
RefSeqiWP_012548240.1. NC_011297.1.

Genome annotation databases

EnsemblBacteriaiACI19608; ACI19608; DICTH_1332.
KEGGidth:DICTH_1332.
PATRICi21807288. VBIDicThe33784_1275.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001146 Genomic DNA. Translation: ACI19608.1.
RefSeqiWP_012548240.1. NC_011297.1.

3D structure databases

ProteinModelPortaliB5YF43.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi309799.DICTH_1332.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACI19608; ACI19608; DICTH_1332.
KEGGidth:DICTH_1332.
PATRICi21807288. VBIDicThe33784_1275.

Phylogenomic databases

eggNOGiENOG4105CYJ. Bacteria.
COG0144. LUCA.
HOGENOMiHOG000037300.
KOiK03500.
OMAiPREAPEC.
OrthoDBiPOG091H02E2.

Enzyme and pathway databases

BioCyciDTHE309799:GHF9-1319-MONOMER.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR018314. Fmu/NOL1/Nop2p_CS.
IPR031341. Methyltr_RsmF_N.
IPR001678. MeTrfase_RsmB/NOP2.
IPR011023. Nop2p.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR004573. rRNA_ssu_MeTfrase_B.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF17125. Methyltr_RsmF_N. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00446. nop2p. 1 hit.
TIGR00563. rsmB. 1 hit.
PROSITEiPS01153. NOL1_NOP2_SUN. 1 hit.
PS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB5YF43_DICT6
AccessioniPrimary (citable) accession number: B5YF43
Entry historyi
Integrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: September 7, 2016
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.