B5YEB3 (B5YEB3_DICT6) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Dihydrodipicolinate synthase EMBL ACI19956.1
EC=4.2.1.52 EMBL ACI19956.1

Gene names

Name:	dapA EMBL ACI19956.1
Ordered Locus Names:	DICTH_1021

Organism

Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) [Complete proteome] [HAMAP]

Taxonomic identifier

309799 [NCBI]

Taxonomic lineage

Bacteria › Dictyoglomi › Dictyoglomales › Dictyoglomaceae › Dictyoglomus

Protein attributes

Sequence length	298 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-aspartate 4-semialdehyde + pyruvate = dihydrodipicolinate + 2 H2O. SAAS SAAS005263
Pathway	Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; (S)-tetrahydrodipicolinate from L-aspartate: step 3/4. SAAS SAAS005263
Subcellular location	Cytoplasm By similarity SAAS SAAS005263.

Ontologies

Keywords
Biological process	Amino-acid biosynthesis Diaminopimelate biosynthesis SAAS SAAS005263 Lysine biosynthesis SAAS SAAS005263
Cellular component	Cytoplasm SAAS SAAS005263
Ligand	Schiff base SAAS SAAS005263
Molecular function	Lyase SAAS SAAS005263 EMBL ACI19956.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	diaminopimelate biosynthetic process Inferred from electronic annotation. Source: HAMAP
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	dihydrodipicolinate synthase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B5YEB3 [UniParc]. Last modified November 25, 2008. Version 1. Checksum: E634274E7DE2E348	FASTA	298	32,687
	10 20 30 40 50 60 MVHFGSLITA MITPFDEYGE INWSEVDRIV EKLIEDGSDS ILVSGTTGEA PTLSKEEKLA 70 80 90 100 110 120 LFERVKKIAG NRAKVIAGTT NYCTKESVEL TKEAEKIGVD GILATAPYYN KPPQDGLYLH 130 140 150 160 170 180 FAKIASETSL PIIVYNIPSR TAVNILPETL KRLAQDCPNI VGVKEASGDI NQIAMIRRLL 190 200 210 220 230 240 PRPFLLYSGD DSMTLPLLSV GGDGVISVAS HIVGKEIKEM INSYFSGNVE KAAELHLKLL 250 260 270 280 290 PIFKGLFLTT NPIPLKEALN LLGYKVGKCR LPLSPIDSKN RAELIKILKE YGFQINEA

References

[1]	"The complete genome sequence of Dictyoglomus thermophilum strain ATCC 35947 / DSM 3960 / H-6-12." Dodson R.J., Durkin A.S., Wu M., Eisen J., Sutton G. Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001146 Genomic DNA. Translation: ACI19956.1.
RefSeq	YP_002250871.1. NC_011297.1.
3D structure databases
ProteinModelPortal	B5YEB3.
ModBase	Search...
Protein-protein interaction databases
STRING	B5YEB3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6945549.
GenomeReviews	Gene locus DICTH_1021 in contig CP001146_GR.
KEGG	dth:DICTH_1021.
PATRIC	21806680. VBIDicThe33784_0993.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG358848.
OMA	CEMEDSN.
ProtClustDB	CLSK2410034.
Family and domain databases
InterPro	IPR013785. Aldolase_TIM. IPR002220. Dihydrodipicolinate_synth-like. IPR020625. Dihydrodipicolinate_synth_AS. IPR020624. Dihydrodipicolinate_synth_CS. IPR005263. Dihydrodipicolinate_synth_DapA. [Graphical view]
Gene3D	G3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KO	K01714.
PANTHER	PTHR12128. DHDPS. 1 hit.
Pfam	PF00701. DHDPS. 1 hit. [Graphical view]
PIRSF	PIRSF001365. DHDPS. 1 hit.
PRINTS	PR00146. DHPICSNTHASE.
TIGRFAMs	TIGR00674. DapA. 1 hit.
PROSITE	PS00665. DHDPS_1. 1 hit. PS00666. DHDPS_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B5YEB3_DICT6

Accession

Primary (citable) accession number: B5YEB3

Entry history

Integrated into UniProtKB/TrEMBL:	November 25, 2008
Last sequence update:	November 25, 2008
Last modified:	December 14, 2011
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)