B5YCQ2 (B5YCQ2_DICT6) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Lipopolysaccharide biosynthesis protein EMBL ACI19365.1

Gene names

Ordered Locus Names:

DICTH_0428

Organism

Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) [Complete proteome] [HAMAP]

Taxonomic identifier

309799 [NCBI]

Taxonomic lineage

Bacteria › Dictyoglomi › Dictyoglomales › Dictyoglomaceae › Dictyoglomus

Protein attributes

Sequence length	917 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	intein-mediated protein splicing Inferred from electronic annotation. Source: InterPro
Molecular function	NAD binding Inferred from electronic annotation. Source: InterPro endonuclease activity Inferred from electronic annotation. Source: InterPro oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B5YCQ2 [UniParc]. Last modified November 25, 2008. Version 1. Checksum: 21946145FFC9E3C6	FASTA	917	104,639
	10 20 30 40 50 60 MSFEKISVVG LGYVGLPLAL EFAKAGLIVY GIEQNPKKVE MVNKGISYID DVKSEELSEV 70 80 90 100 110 120 VNKGVLKAFV DFGSVKDSDA VIICVPTPLG AHKEPDISYI VNVTNEISKF LKKGQLIVLE 130 140 150 160 170 180 STTYPGTTEE VVLPILEKSG LKGGEDFYLA FSPERVDPGN KKFTTKDIPK VVGGINEVST 190 200 210 220 230 240 EKAAELYSLI VPQVHKVSSP KVAEMEKLLE NIFRLVNISF INELAILCGK MGIDVWEVIE 250 260 270 280 290 300 AASTKPYGFM PFYPGPGLGG HCLLGKEKIL VKNSKISNVY SLEELFKLES KENKVYKIGD 310 320 330 340 350 360 LEVLKTNDLF VNSLNDSNLS SSWMPVSYLF KRKYKGDLVK IITEDNRKLI VTEKHPMLRL 370 380 390 400 410 420 DNGSVEVVEA RDLKVGDLLP LFKENFEEKI EIREVVVDLI KELSEEWENR VRVKIINGSW 430 440 450 460 470 480 VNYKAEIYSI CKTDRKYDYI KGDYLPLGIF RRLEREKKIN IEHDSLILLT GRGPSTAKFP 490 500 510 520 530 540 AVVKIDKDLA RFIGYYLSEG CATKERGYYR IRLTINKDEK ELFSDIESIL NKLGLTHSIY 550 560 570 580 590 600 LSPKFKAKTI RINSPLLGWL LIDRLRCGKD SYSMRIPDEL MSASLDLKEE LLKGLFRGDG 610 620 630 640 650 660 DIHYRNERRN YIKNGKKYNH RNNSLVIGYF SISDVLFYQI IYLLQEMGIY PSISKNKNHL 670 680 690 700 710 720 KISGYDNLKK LTDWFLDEKG RKYSNYFRFS LKKINNKRNN FPIPLVSVKK IEFESVDNID 730 740 750 760 770 780 VYSLEVENTH TFAVGSGIYV HNCIPIDPFY LSWKAKEYDL GVRFIELAGE INDNMPRYIV 790 800 810 820 830 840 QLVMEALNKH KKAVNGSKIL IIGVAYKPNV GDPRESPALK IIPLLEELNG EVEFYDPYIS 850 860 870 880 890 900 EIKIENNKTK EVKYMKSCVL DEEKVRNADC VLIITDHDNI DYEMIFKNSK LIVDTRNALR 910 KRGIKVDDRV TILGVSK

References

[1]	"The complete genome sequence of Dictyoglomus thermophilum strain ATCC 35947 / DSM 3960 / H-6-12." Dodson R.J., Durkin A.S., Wu M., Eisen J., Sutton G. Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001146 Genomic DNA. Translation: ACI19365.1.
RefSeq	YP_002250310.1. NC_011297.1.
3D structure databases
ProteinModelPortal	B5YCQ2.
ModBase	Search...
Protein-protein interaction databases
STRING	B5YCQ2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6946017.
GenomeReviews	Gene locus DICTH_0428 in contig CP001146_GR.
KEGG	dth:DICTH_0428.
PATRIC	21805506. VBIDicThe33784_0431.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	HEEEYIN.
ProtClustDB	CLSK796708.
Family and domain databases
InterPro	IPR008927. 6-PGluconate_DH_C-like. IPR013328. DH_multihelical. IPR003586. Hedgehog_hint_C. IPR003587. Hedgehog_hint_N. IPR006142. INTEIN. IPR004042. Intein_endonuc. IPR006141. Intein_splice_site. IPR016040. NAD(P)-bd_dom. IPR017476. Nucleotide_sugar_DH. IPR014027. UDP-Glc/GDP-Man_DH_C. IPR014026. UDP-Glc/GDP-Man_DH_dimer. IPR001732. UDP-Glc/GDP-Man_DH_N. [Graphical view]
Gene3D	G3DSA:3.40.50.720. NAD(P)-bd. 2 hits. G3DSA:1.10.1040.10. Opine_DH. 1 hit.
Pfam	PF00984. UDPG_MGDP_dh. 1 hit. PF03720. UDPG_MGDP_dh_C. 1 hit. PF03721. UDPG_MGDP_dh_N. 1 hit. [Graphical view]
PRINTS	PR00379. INTEIN.
SMART	SM00305. HintC. 1 hit. SM00306. HintN. 1 hit. SM00984. UDPG_MGDP_dh_C. 1 hit. [Graphical view]
SUPFAM	SSF48179. 6DGDH_C_like. 1 hit. SSF52413. UDP-Glc/GDP-Man_DH_C. 1 hit.
TIGRFAMs	TIGR01443. Intein_Cterm. 1 hit. TIGR01445. Intein_Nterm. 1 hit. TIGR03026. NDP-sugDHase. 1 hit.
PROSITE	PS50818. INTEIN_C_TER. 1 hit. PS50819. INTEIN_ENDONUCLEASE. 1 hit. PS50817. INTEIN_N_TER. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B5YCQ2_DICT6

Accession

Primary (citable) accession number: B5YCQ2

Entry history

Integrated into UniProtKB/TrEMBL:	November 25, 2008
Last sequence update:	November 25, 2008
Last modified:	January 25, 2012
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)