Skip Header

Contribute Send feedback
Read comments (?) or add your own

B5YB85 (B5YB85_DICT6) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Type II restriction enzyme DpnII EMBL ACI19398.1
EC=3.1.21.4 EMBL ACI19398.1
Gene names
Ordered Locus Names:DICTH_1799
OrganismDictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) [Complete proteome] [HAMAP]
Taxonomic identifier309799 [NCBI]
Taxonomic lineageBacteria › Dictyoglomi › Dictyoglomales › Dictyoglomaceae › Dictyoglomus

Protein attributes

Sequence length296 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL ACI19398.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processDNA restriction-modification system

Inferred from electronic annotation. Source: InterPro

   Molecular functionDNA binding

Inferred from electronic annotation. Source: InterPro

Type II site-specific deoxyribonuclease activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B5YB85 [UniParc].

Last modified November 25, 2008. Version 1.
Checksum: 1C27B6695C1A63B5

FASTA29634,842
        10         20         30         40         50         60 
MVKFKELGFK DFDEYKSYFF DNLLSSNKTY DYFVDWTKVK EAVNQHLIEL SLLNSLTKVE 

        70         80         90        100        110        120 
PKDIKKHLQD LLLEYPQVVE VIPLLIAERI RNGKIDIFEP SIEEFITFEF ERSRINESNV 

       130        140        150        160        170        180 
YQIVNFCHKT GILDLFQEVT DIHDYLLGVE VGLDTNARKN RSGDIFERMC QQKIKKLIST 

       190        200        210        220        230        240 
EDYVMVENDS NFSLYPVISK EESKGKTHDI VIYKNNSPIL IIECNFYNVV GSKPISIAES 

       250        260        270        280        290 
YIEMNRAAKE KGIDFLWITD GPAWHHMKEP LLRSMKEIDW ILNFKMLDFL RKILKV

« Hide

References

[1]"The complete genome sequence of Dictyoglomus thermophilum strain ATCC 35947 / DSM 3960 / H-6-12."
Dodson R.J., Durkin A.S., Wu M., Eisen J., Sutton G.
Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001146 Genomic DNA. Translation: ACI19398.1.
RefSeqYP_002251610.1. NC_011297.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGB5YB85.

Protein family/group databases

REBASE18946. DthHORF1800P.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6946722.
GenomeReviewsGene locus DICTH_1799 in contig CP001146_GR.
KEGGdth:DICTH_1799.
PATRIC21808222. VBIDicThe33784_1738.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG288087.
OMATNARKNR.
ProtClustDBCLSK2775364.

Family and domain databases

InterProIPR021191. Restrct_endonuc_II_DpmII.
IPR007637. Restrct_endonuc_II_DpmII-like.
[Graphical view]
KOK01155.
PfamPF04556. DpnII. 1 hit.
[Graphical view]
PIRSFPIRSF016080. Restrict_endonuc_II_DpmII. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB5YB85_DICT6
AccessionPrimary (citable) accession number: B5YB85
Entry history
Integrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: December 14, 2011
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info