B5YAI1 (B5YAI1_DICT6) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Ribulokinase HAMAP MF_00520 RuleBase RU003455
EC=2.7.1.16 HAMAP MF_00520 RuleBase RU003455

Gene names

Name:	araB HAMAP MF_00520 EMBL ACI19702.1
Ordered Locus Names:	DICTH_1637

Organism

Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) [Complete proteome] [HAMAP]

Taxonomic identifier

309799 [NCBI]

Taxonomic lineage

Bacteria › Dictyoglomi › Dictyoglomales › Dictyoglomaceae › Dictyoglomus

Protein attributes

Sequence length	570 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	ATP + L(or D)-ribulose = ADP + L(or D)-ribulose 5-phosphate. HAMAP MF_00520 RuleBase RU003455 SAAS SAAS005929
Pathway	Carbohydrate degradation; L-arabinose degradation via L-ribulose; D-xylulose 5-phosphate from L-arabinose (bacterial route): step 2/3. HAMAP MF_00520 RuleBase RU003455 SAAS SAAS005929
Sequence similarities	Belongs to the ribulokinase family. HAMAP MF_00520 RuleBase RU003455

Ontologies

Keywords
Biological process	Arabinose catabolism HAMAP MF_00520 RuleBase RU003455 SAAS SAAS005929 Carbohydrate metabolism
Ligand	ATP-binding HAMAP MF_00520 SAAS SAAS005929 Nucleotide-binding
Molecular function	Kinase HAMAP MF_00520 RuleBase RU003455 SAAS SAAS005929 EMBL ACI19702.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	L-arabinose catabolic process Inferred from electronic annotation. Source: HAMAP
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ribulokinase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B5YAI1 [UniParc]. Last modified November 25, 2008. Version 1. Checksum: D080BB369744B0A2	FASTA	570	63,753
	10 20 30 40 50 60 MGKYAIGLDY GTNSVRALVV DIRNGEELGT YVYNYEHGED GVVLDPKNPN VARQHPADYI 70 80 90 100 110 120 KGLEVTIEGA LKEAERNSKE FSRKDVIGIG IDTTGSTPLP VDRDGIPLAF HEEFKDNINA 130 140 150 160 170 180 LAWLWKDHSS YEEAEEITRL ANEKGYPYLR KYGGVYSSEW FFSKILHCLR VDPKVFDAAY 190 200 210 220 230 240 TWVEICDYIP AVLTGKTKPH EIKRSICAAG HKAMFNLEWG GLPSKEFLSQ LHPKLAELRD 250 260 270 280 290 300 RLYNKAYTSD VPFGYISEYY AEKFGLNKDV VVAVGAFDAH MGGVGAGIKP GILVKVIGTS 310 320 330 340 350 360 TCDMMVVPNT EKLPDIPGLC GIVDGSILPG YYGLEAGQSA VGDIFNWFVK YLTPREYFGE 370 380 390 400 410 420 EGRNKDLHQL LTERAEKLKT GESGLLALDW NNGNRTVLVD AKLTGLLIGQ TLQTKPEEIY 430 440 450 460 470 480 RALIEATAFG ARVIMERFEE YGVKVNEVIA CGGIPEKNPF VMQVYADVLG RTIKISYSSQ 490 500 510 520 530 540 TPALGAAIFG AVAAGYEKSG YKNVEEAQKA ICRVKDKVYY PREEDRNIYN RLYKLYKELH 550 560 570 DIFGTKEASY NLYHVMKELI EIRDKVKGVK

References

[1]	"The complete genome sequence of Dictyoglomus thermophilum strain ATCC 35947 / DSM 3960 / H-6-12." Dodson R.J., Durkin A.S., Wu M., Eisen J., Sutton G. Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001146 Genomic DNA. Translation: ACI19702.1.
RefSeq	YP_002251451.1. NC_011297.1.
3D structure databases
ProteinModelPortal	B5YAI1.
ModBase	Search...
Protein-protein interaction databases
STRING	B5YAI1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6945512.
GenomeReviews	Gene locus DICTH_1637 in contig CP001146_GR.
KEGG	dth:DICTH_1637.
PATRIC	21807898. VBIDicThe33784_1577.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG312681.
OMA	NGRRTPD.
ProtClustDB	CLSK2405085.
Family and domain databases
HAMAP	MF_00520. Ribulokinase. [Tree]
InterPro	IPR000577. Carb_kinase_FGGY. IPR018485. Carb_kinase_FGGY_C. IPR018484. Carb_kinase_FGGY_N. IPR005929. L_ribulokin. [Graphical view]
KO	K00853.
PANTHER	PTHR10196. FGGY_kin. 1 hit.
Pfam	PF02782. FGGY_C. 1 hit. PF00370. FGGY_N. 1 hit. [Graphical view]
TIGRFAMs	TIGR01234. L-ribulokinase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B5YAI1_DICT6

Accession

Primary (citable) accession number: B5YAI1

Entry history

Integrated into UniProtKB/TrEMBL:	November 25, 2008
Last sequence update:	November 25, 2008
Last modified:	December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)