B5YA13 (B5YA13_COPPD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Glycogen synthase HAMAP MF_00484
EC=2.4.1.21 HAMAP MF_00484

Alternative name(s):
Starch [bacterial glycogen] synthase HAMAP MF_00484

Gene names

Name:	glgA HAMAP MF_00484
Ordered Locus Names:	COPRO5265_1309

Organism

Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) [Complete proteome] [HAMAP]

Taxonomic identifier

309798 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Thermoanaerobacterales › Thermodesulfobiaceae › Coprothermobacter

Protein attributes

Sequence length	467 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP MF_00484 SAAS SAAS011835
Catalytic activity	ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP MF_00484
Pathway	Glycan biosynthesis; glycogen biosynthesis. HAMAP MF_00484 SAAS SAAS011835
Sequence similarities	Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily. HAMAP MF_00484

Ontologies

Keywords
Biological process	Glycogen biosynthesis HAMAP MF_00484 SAAS SAAS011835
Molecular function	Glycosyltransferase HAMAP MF_00484 SAAS SAAS011835 EMBL ACI17099.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycogen biosynthetic process Inferred from electronic annotation. Source: HAMAP
Molecular function	starch synthase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Binding site	18	1	ADP-glucose By similarity HAMAP MF_00484

Sequences

	Sequence		Length	Mass (Da)
	B5YA13 [UniParc]. Last modified November 25, 2008. Version 1. Checksum: 75A0C2861A078A01	FASTA	467	52,008
	10 20 30 40 50 60 MKTLKVLLIG AECAPFVKVG GLADVLGALP KYISRQGVNA ATVVPLYQSI DREQFVLEEE 70 80 90 100 110 120 TALNVETGVG PMLFRVFKCV DKDGILHYFL EQEKYFSRSN IYGEKDDAER FFAFSMGTLE 130 140 150 160 170 180 LAKREKFDIL HANDWHTALV PVLVRQDGLP FKTVFTIHNL AYQGLCSRSL SGFLKLTPDM 190 200 210 220 230 240 DALIRQDDNT MNPMKGGILC ADYVTTVSPT YAKEILTPEY GVGLENVLVQ RKDRLIGILN 250 260 270 280 290 300 GIDVELYNPA TDPHIYVNFT NEWEKKLANT EALRKELNLE NGPYPVIGLV SRFVEQKGID 310 320 330 340 350 360 LVAEALDSIV ELGAQLVALG TGDKKYEELL FKKAGKYHNM VSVNITFDPV LAQRIYAGST 370 380 390 400 410 420 HFLMPSRFEP CGLGQMIALR YGSIPIVRRT GGLADTVFDA EKEPNGNGFV FDEPTVDGLL 430 440 450 460 GAVKRAVAYY KDEQMHKSLF NRAIASDVSW DSSAKAYVKL YEKALIS

References

[1]	"The complete genome sequence of Coprothermobacter proteolyticus strain ATCC 5245 / DSM 5265 / BT." Dodson R.J., Durkin A.S., Wu M., Eisen J., Sutton G. Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001145 Genomic DNA. Translation: ACI17099.1.
RefSeq	YP_002247610.1. NC_011295.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B5YA13.
Protein family/group databases
CAZy	GT5. Glycosyltransferase Family 5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6944292.
GenomeReviews	Gene locus COPRO5265_1309 in contig CP001145_GR.
KEGG	cpo:COPRO5265_1309.
PATRIC	21475412. VBICopPro72829_1211.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG596384.
OMA	PIVHEIG.
Family and domain databases
HAMAP	MF_00484. Glycogen_synth. [Tree]
InterPro	IPR001296. Glyco_trans_1. IPR011835. Glycogen/starch_synth. IPR013534. Starch_synth_cat_dom. [Graphical view]
KO	K00703.
Pfam	PF08323. Glyco_transf_5. 1 hit. PF00534. Glycos_transf_1. 1 hit. [Graphical view]
TIGRFAMs	TIGR02095. GlgA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B5YA13_COPPD

Accession

Primary (citable) accession number: B5YA13

Entry history

Integrated into UniProtKB/TrEMBL:	November 25, 2008
Last sequence update:	November 25, 2008
Last modified:	December 14, 2011
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)