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B5Y630

- B5Y630_COPPD

UniProt

B5Y630 - B5Y630_COPPD

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Protein
Submitted name:

Type II restriction enzyme R protein

Gene
hsdR, COPRO5265_1446
Organism
Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: InterPro
  2. Type II site-specific deoxyribonuclease activity Source: InterPro

GO - Biological processi

  1. DNA restriction-modification system Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciCPRO309798:GH7M-1396-MONOMER.

Protein family/group databases

REBASEi18906. Cpr5265ORF1447P.

Names & Taxonomyi

Protein namesi
Submitted name:
Type II restriction enzyme R proteinImported
Gene namesi
Name:hsdRImported
Ordered Locus Names:COPRO5265_1446Imported
OrganismiCoprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT)Imported
Taxonomic identifieri309798 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaThermoanaerobacteralesThermodesulfobiaceaeCoprothermobacter
ProteomesiUP000001732: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi309798.COPRO5265_1446.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG12396.
HOGENOMiHOG000244578.
KOiK01155.
OMAiTNYYGGG.
OrthoDBiEOG60KN76.

Family and domain databases

InterProiIPR021191. Restrct_endonuc_II_DpmII.
IPR007637. Restrct_endonuc_II_DpmII-like.
[Graphical view]
PfamiPF04556. DpnII. 1 hit.
[Graphical view]
PIRSFiPIRSF016080. Restrict_endonuc_II_DpmII. 1 hit.

Sequencei

Sequence statusi: Complete.

B5Y630-1 [UniParc]FASTAAdd to Basket

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MKYSNLFYKL ISCKDEDDVF EYLIRNLKET IISWDFFVAW EKVINKVEDI    50
EISLNLLNYL VGKENITEKF AELVSKYPEV IDVLPVLVAW RAKNVKVLDP 100
LDDNIFNYKE YSFEKKSSYT TEEIASLTEF ADKTGLLAMF KNENIKSVVD 150
YVTGVEVGLD TNARKNRSGA AMEMITELLI KRICAKNRYN YISQATAHKI 200
NELFGYEVKV DKSERSFDFA IDNGDKLYLV ETNYYGGGGS KLKAVAGEFV 250
TLCRFLKRET PQHTFIWITD GLGWKTAKKP LREAFDEVDY ILNLSMLENG 300
VLENIILEGL 310
Length:310
Mass (Da):35,679
Last modified:November 25, 2008 - v1
Checksum:iBA5EA283488D44EA
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001145 Genomic DNA. Translation: ACI17600.1.
RefSeqiWP_012544252.1. NC_011295.1.
YP_002247709.1. NC_011295.1.

Genome annotation databases

EnsemblBacteriaiACI17600; ACI17600; COPRO5265_1446.
GeneIDi6944124.
KEGGicpo:COPRO5265_1446.
PATRICi21475604. VBICopPro72829_1307.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001145 Genomic DNA. Translation: ACI17600.1 .
RefSeqi WP_012544252.1. NC_011295.1.
YP_002247709.1. NC_011295.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 309798.COPRO5265_1446.

Protein family/group databases

REBASEi 18906. Cpr5265ORF1447P.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACI17600 ; ACI17600 ; COPRO5265_1446 .
GeneIDi 6944124.
KEGGi cpo:COPRO5265_1446.
PATRICi 21475604. VBICopPro72829_1307.

Phylogenomic databases

eggNOGi NOG12396.
HOGENOMi HOG000244578.
KOi K01155.
OMAi TNYYGGG.
OrthoDBi EOG60KN76.

Enzyme and pathway databases

BioCyci CPRO309798:GH7M-1396-MONOMER.

Family and domain databases

InterProi IPR021191. Restrct_endonuc_II_DpmII.
IPR007637. Restrct_endonuc_II_DpmII-like.
[Graphical view ]
Pfami PF04556. DpnII. 1 hit.
[Graphical view ]
PIRSFi PIRSF016080. Restrict_endonuc_II_DpmII. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The complete genome sequence of Coprothermobacter proteolyticus strain ATCC 5245 / DSM 5265 / BT."
    Dodson R.J., Durkin A.S., Wu M., Eisen J., Sutton G.
    Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35245 / DSM 5265 / BT.

Entry informationi

Entry nameiB5Y630_COPPD
AccessioniPrimary (citable) accession number: B5Y630
Entry historyi
Integrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: September 3, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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