Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Type II restriction enzyme R protein

Gene

hsdR

Organism
Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: InterPro
  2. Type II site-specific deoxyribonuclease activity Source: InterPro

GO - Biological processi

  1. DNA restriction-modification system Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciCPRO309798:GH7M-1396-MONOMER.

Protein family/group databases

REBASEi18906. Cpr5265ORF1447P.

Names & Taxonomyi

Protein namesi
Submitted name:
Type II restriction enzyme R proteinImported
Gene namesi
Name:hsdRImported
Ordered Locus Names:COPRO5265_1446Imported
OrganismiCoprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT)Imported
Taxonomic identifieri309798 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaThermoanaerobacteralesThermodesulfobiaceaeCoprothermobacter
ProteomesiUP000001732 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi309798.COPRO5265_1446.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG12396.
HOGENOMiHOG000244578.
KOiK01155.
OMAiTNYYGGG.
OrthoDBiEOG60KN76.

Family and domain databases

InterProiIPR021191. Restrct_endonuc_II_DpmII.
IPR007637. Restrct_endonuc_II_DpmII-like.
[Graphical view]
PfamiPF04556. DpnII. 1 hit.
[Graphical view]
PIRSFiPIRSF016080. Restrict_endonuc_II_DpmII. 1 hit.

Sequencei

Sequence statusi: Complete.

B5Y630-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKYSNLFYKL ISCKDEDDVF EYLIRNLKET IISWDFFVAW EKVINKVEDI
60 70 80 90 100
EISLNLLNYL VGKENITEKF AELVSKYPEV IDVLPVLVAW RAKNVKVLDP
110 120 130 140 150
LDDNIFNYKE YSFEKKSSYT TEEIASLTEF ADKTGLLAMF KNENIKSVVD
160 170 180 190 200
YVTGVEVGLD TNARKNRSGA AMEMITELLI KRICAKNRYN YISQATAHKI
210 220 230 240 250
NELFGYEVKV DKSERSFDFA IDNGDKLYLV ETNYYGGGGS KLKAVAGEFV
260 270 280 290 300
TLCRFLKRET PQHTFIWITD GLGWKTAKKP LREAFDEVDY ILNLSMLENG
310
VLENIILEGL
Length:310
Mass (Da):35,679
Last modified:November 25, 2008 - v1
Checksum:iBA5EA283488D44EA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001145 Genomic DNA. Translation: ACI17600.1.
RefSeqiYP_002247709.1. NC_011295.1.

Genome annotation databases

EnsemblBacteriaiACI17600; ACI17600; COPRO5265_1446.
KEGGicpo:COPRO5265_1446.
PATRICi21475604. VBICopPro72829_1307.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001145 Genomic DNA. Translation: ACI17600.1.
RefSeqiYP_002247709.1. NC_011295.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi309798.COPRO5265_1446.

Protein family/group databases

REBASEi18906. Cpr5265ORF1447P.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACI17600; ACI17600; COPRO5265_1446.
KEGGicpo:COPRO5265_1446.
PATRICi21475604. VBICopPro72829_1307.

Phylogenomic databases

eggNOGiNOG12396.
HOGENOMiHOG000244578.
KOiK01155.
OMAiTNYYGGG.
OrthoDBiEOG60KN76.

Enzyme and pathway databases

BioCyciCPRO309798:GH7M-1396-MONOMER.

Family and domain databases

InterProiIPR021191. Restrct_endonuc_II_DpmII.
IPR007637. Restrct_endonuc_II_DpmII-like.
[Graphical view]
PfamiPF04556. DpnII. 1 hit.
[Graphical view]
PIRSFiPIRSF016080. Restrict_endonuc_II_DpmII. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The complete genome sequence of Coprothermobacter proteolyticus strain ATCC 5245 / DSM 5265 / BT."
    Dodson R.J., Durkin A.S., Wu M., Eisen J., Sutton G.
    Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35245 / DSM 5265 / BTImported.

Entry informationi

Entry nameiB5Y630_COPPD
AccessioniPrimary (citable) accession number: B5Y630
Entry historyi
Integrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: April 1, 2015
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.